Sequence details bmy_08854 (Coding sequence)

Part of scaffold_406 (Scaffold)

For more information consult the page for scaffold_406 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMD11 ENSTTRG00000011198 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010619, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.37%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0233)

PSMD11 ENSBTAG00000018897 (Cow)

Gene Details

26S proteasome non-ATPase regulatory subunit 11

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025152, Cow)

Protein Percentage 100.0%
cDNA percentage 97.49%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0987)

PSMD11  (Minke Whale)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 11

External Links

Gene match (Identifier: BACU019804, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.64%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0093)

Additional orthologs identified in other species via the OPTIC pipeline.

PSMD11 (Human)   Psmd11 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1140 bp    Location:814114..842990   Strand:+
Raw sequence 
>bmy_08854
ATGGCGGCTGCGGCAGTGGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGGCCTCCATCGACATCCTCCACTCCATCGTGAAGCGTGACATTCAGGAGAATGATGAGGAGGCAGTGCAGGTCAAAGAGCAGAGCATCCTGGAACTGGGGTCTCTCCTGGCAAAGACTGGACAAGCTGCAGAGCTTGGAGGACTGCTGAAGTATGTGCGACCCTTCTTGAATTCCATCAGCAAGGCTAAAGCAGCTCGTCTGGTCCGATCTCTTCTTGATCTGTTTCTTGATATGGAAGCAGCTACAGGACAGGAGGGTGAAAGGAAACACTCTCAGGTCGAGTTGTGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAGAGAACTTTCTTACGCCAAGCTTTGGAGGCAAGACTGGTGTCTTTGTACTTTGATACCAAGAGGTACCAGGAAGCATTACATTTGGGTTCTCAGTTGCTGCGGGAGTTGAAAAAGATGGATGACAAAGCCCTTTTGGTGGAAGTACAGCTTTTAGAAAGCAAAACATACCATGCCCTGAGCAACCTGCCAAAAGCCCGAGCTGCCTTAACCTCTGCTCGAACCACAGCAAATGCCATTTACTGCCCCCCTAAATTGCAGGCCACCTTGGATATGCAGTCAGAAGATGTCCAGGCCTTGGTGAGCGGGAAGCTTGCACTTCGGTATGCGGGGAGGCAGACAGAAGCATTAAAATGTGTGGCTCAGGCTAGCAAGAACAGATCACTGGCAGATTTTGAAAAGGCTCTGACAGATTACCGGGCAGAGCTCCGGGATGACCCAATCATCAGCACACACTTGGCCAAGTTGTATGATAACTTGCTGGAACAGAATCTGATCCGAGTCATTGAGCCTTTTTCCCGAGTACAGATCGAACACATATCTAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGGAAATTATCACAGATGATTCTTGACAAGAAATTTCATGGGATCTTGGACCAGGGGGAGGGTGTCTTGATTATTTTTGATGAACCCCCAGTAGATAAAACTTATGAAGCTGCTCTGGAAACAATTCAGAACATGAGTAAAGTAGTGGATTCCCTCTACAACAAAGCCAAGAAACTGACATAG

Related Sequences

bmy_08854T0 Protein

Length: 380 aa      View alignments
>bmy_08854T0
MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEGERKHSQVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT*