Part of scaffold_410 (Scaffold)

For more information consult the page for scaffold_410 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM32 ENSTTRG00000002415 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 32

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002261, Bottlenosed dolphin)

Protein Percentage 98.77%
cDNA percentage 97.29%
Ka/Ks Ratio 0.06334 (Ka = 0.0058, Ks = 0.0909)

TRIM32 ENSBTAG00000017155 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRIM32

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022801, Cow)

Protein Percentage 94.33%
cDNA percentage 89.69%
Ka/Ks Ratio 0.04429 (Ka = 0.0258, Ks = 0.5828)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1962 bp    Location:170792..160685   Strand:-
>bmy_08858
ATGGCTGCGGCAGCAGCTTCTCACCTGAACCTGGATGCCCTGCGGGAAGTGCTGGAATGCCCCATCTGCATGGAGTCCTTCACAGAGGAGCAGATGCGGCCCAAGCTCCTGCACTGTGGCCATACCATCTGCCGCCAGTGCCTGGAGAAGCTKCTGGCCAGTAGCATCAATGGCGTCCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAACCAGCCTGACCCAGCTGACGGACAACCTGACGGTGCTGAAGATCATTGACACGGCTGGGCTCAGTGAGGCCGTGGGGCTGCTCATGTGCCGCTCGTGCGGGCGGCGGCTGCCCCGGCAGTTCTGCCGAAGCTGCAGCGTGGTGTTATGTGAGCCCTGCCGGGAGGCGGACCACCAGCCTCCTGGCCACTGTACACTCCCTGTCAAAGAAGCAGCTGAGGAGCGGCGTCGGGACTTTGGAGAGAAGTTGGCCCGTCTGCGGGAGCTTATGGGGGAGCTGCAGCGCCGGAAGGTAGCCTTGGAAGGAGTCTCCAAGGACCTTCAGGCAAGGTATAGAGCAGTCCTCCAGGAGTATGGGCACGAGGAGCGCAGGGTCCAGGAAGAGCTGGCTCGCTCTCGGAAGTTCTTCACAGGCTCTCTGGCTGAGGTTGAAAAGTCTAATAGTCAAGTGGTAGAGGAGCAGAGTTACCTGCTGAACATCGCCGAGGTGCAGGCTGTGTCTCGCTGTGACTACTTCTTGGCCAAGATCAAGCAGGCAGACGTAGCACTACTGGAAGAGACAGCCGATGAGGAGGAGCCGGAGCTCACTGCCAGCCTGCCCCGGGAGCTCACCCTGCAGGATGTGGAGCTCCTTAAGGTCGGCCATGTCGGCCCCCTCCAAATCGGGCAGGCCGCTAAGAAGCCCCGGACGGTCAACATGGAAGACTCCTGGGCCATGGAGGCTGCAGCCTCTGCTGCCTCTTCCTCTGTTACATTTAGAGAGATGGACATGAGCCCTGAGGAAGTGGTTGCTAGCCCTAGGGCCTCGCCTGCTAAGCAGCGGGGTTCTGACACAGCCGCCAACATCCAGCAGTGCCTCTTCCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGGCATGTTCAACCTTCCAGTCAGTCTCTACGTGACCAGTCAAGGCGAAGTGCTGGTTGCTGACCGTGGCAACTACCGTATACAAGTCTTTACCCGCAAAGGCTTTTTGAAGGAGATCCGCCGCAGCCCCAGTGGCATTGATAGCTTTGTGCTGAGCTTCCTTGGGGCTGACTTGCCCAATCTCACTCCTCTCTCAGTTGCCATGAACTGCCATGGGCTGATTGGTGTGACTGACAGCTATGACAACTCCCTCAAGGTATACACCTTGGATGGCCACTGCGTGGCCTGTCACAGGAGCCAGCTGAGCAAACCCTGGGGCATCACAGCCCTTCCATCTGGCCAATTTGTGGTAACTGATGTGGAAGGTGGAAAGCTCTGGTGCTTCACTGTTGACCGAGGGGCAGGGGTGGTCAAATACAGCTGCCTCTGCAGTGCTGTGCGGCCCAAGTTTGTCACCTGTGACGCCGAAGGCACTGTCTACTTCACCCAGGGCTTGGGCCTCAATCTGGAAAATCGGCAAAACGAGCACCACCTGGAGGGCGGCTTCTCCATCGGCTCTGTGGGCCCTGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAACGAGGATTTCCGCTGCATTGCTGGCATGTGTGTGGATGCCCGTGGTGATCTCATCGTGGCTGACAGCAGTCGCAAAGAAATTCTCCACTTTCCTAAAGGTGGGGGCTATAGTGTCCTTATTCGAGAGGGGCTCACCTGTCCAGTGGGCATCGCCCTCACACCTAAGGGGCAGCTGCTGGTCTTGGACTGTTGGGATCATTGCATCAAGATTTACAGCTACCATCTGAGAAGATATTCTACCCCTTAG

Related Sequences

bmy_08858T0 Protein

Length: 654 aa      View alignments
>bmy_08858T0
MAAAAASHLNLDALREVLECPICMESFTEEQMRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCSVVLCEPCREADHQPPGHCTLPVKEAAEERRRDFGEKLARLRELMGELQRRKVALEGVSKDLQARYRAVLQEYGHEERRVQEELARSRKFFTGSLAEVEKSNSQVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAAKKPRTVNMEDSWAMEAAASAASSSVTFREMDMSPEEVVASPRASPAKQRGSDTAANIQQCLFLKKMGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENRQNEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEILHFPKGGGYSVLIREGLTCPVGIALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP*