Part of scaffold_419 (Scaffold)

For more information consult the page for scaffold_419 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHAF1B ENSTTRG00000016600 (Bottlenosed dolphin)

Gene Details

chromatin assembly factor 1, subunit B (p60)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015737, Bottlenosed dolphin)

Protein Percentage 96.24%
cDNA percentage 97.38%
Ka/Ks Ratio 0.34383 (Ka = 0.018, Ks = 0.0523)

CHAF1B ENSBTAG00000011880 (Cow)

Gene Details

chromatin assembly factor 1 subunit B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015764, Cow)

Protein Percentage 90.2%
cDNA percentage 89.6%
Ka/Ks Ratio 0.16627 (Ka = 0.0511, Ks = 0.3075)

CHAF1B  (Minke Whale)

Gene Details

chromatin assembly factor 1, subunit B (p60)

External Links

Gene match (Identifier: BACU010424, Minke Whale)

Protein Percentage 98.08%
cDNA percentage 98.8%
Ka/Ks Ratio 0.40034 (Ka = 0.0088, Ks = 0.022)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1686 bp    Location:718389..694276   Strand:-
>bmy_08869
ATGAAAGTCATCACTTGTGAGATCGCCTGGCATAACAAGGAGCCAGTGTACAGCCTGGACTTCCAGCACGGAGCCGCCGGGAGGATCCACAGGCTGGCCTCCGCGGGGGTGGACACCGCTGTCAGGATCTGGAAGGTAGAAAAAGGACCAGATGGAAAGGCCATTGTTGAATTTTTGTCCAATCTCGCTCGCCATACCAAAGCTGTCAATGTCGTGCGTTTTTCTCCAAATGGGGAACTTTTAGCATCAGGAGGGGATGATGCTGTCATTCTGCTGTGGAAGGTGAATGACAACAAGGAAGCAGAACAGATTGCTTTTCAGGACGAGGATGAGGCTCAGCTGAACAAGGAGAACTGGACTGTCGTAAAAACCCTGAGGGGCCACTTAGAAGATGTGTATGATATTTGCTGGGCAACCGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACGGCCATCATATGGGATGTCAGTAAAGGACAAAAGATCTCAATTTTTAATGAACATAAAAGTTATGTACAAGGAGTAACCTGGGATCCTTTGGGTCAGTATGTTGCTACCCTGAGCTGTGACAGGATCCTGAGGGTGTACAGCACACAGAAGAAACGTGTGGCTTTTAATGTCTCAAAGATGCTATCTGGAGTAGGGGCTGAAGGAGAGGCGAGAAGTTACCGGATGTTCCATGACGACAGCATGAAATCATTCTTTCGTAGACTTAGTTTCACTCCTGATGGATCTTTGCTCCTCACACCAGCTGGATGTGTGGAATCCGGTGAAAACGTAACAAATACAACTTATGTTTTCTCCAGGAAAAATCTTAAAAGGCCTATCGCCCATCTTCCGTGTCCTGGGAAGGCGACGCTCGCTGTTCGCTGCTGCCCCGTCTACTTTGAGCTGAGGCCAGCGGTGGAAGCAGAGCCAGGTGTGGAGCTGGTGAGCCTGCCGTACCGCTTGGTGTTTGCTGTGGCTTCTGAAGACTCTGTGCTTTTGTACGACACCCAGCAGCTGTTCCCGTTTGGTTACGTGTCTAACATACATTACCACACCCTGAGCGATATTTCCTGGTCCAGCGACGGGGCCTTCCTGGCCATCTCCTCCACGGATGGTTACTGCTCCTTCGTGACGTTCGAGAAGGATGAGCTTGGAATTCGCTTGAAAGAGAAGCCAGTGCTGTGCGTGAGAACTCCCGATACAGTGAAGAAAACCAAGAGTCAGACACACCCAGGGTCTTCGCCAGGACCCAGGCTGGGAGAGGGAACCCCCAGCAGCAGAGTCCGGGACCCCAGCAGCCCCTCTGCGACGCCCCCTCAGGCGAAACAGTCTCCGGCCCCCACGGCGGCCAAGGACATGCCTGTGACCGCTCCCGGTGCCAGAGGCTTCCTGGCAGGGCCCTCAGAGGAGAAGACCCTGCAGCCCGGCAGTCAGAATGCGAAAGCCCACCCATCCCGCAGGGTCACTGTGAACACACTGCAGGCCTGGAGCAAGTCAGCACCGCGGAGAATAAACTTAATACCCTTAAAGACAGATACTCCACCGAATTCTATACCAACCAGCGTAATTTCCAGCCCTTCCACAGAAGAAATTCAACCAGAGATGCCTGGAGACCTTCAGGTCAGTCCCCCGGAGCTTAAGCGGCCCAGACTCAGTGAGCACAAAGAAGGTCCCCAATGTCTGGACCCCTGA

Related Sequences

bmy_08869T0 Protein

Length: 562 aa      View alignments
>bmy_08869T0
MKVITCEIAWHNKEPVYSLDFQHGAAGRIHRLASAGVDTAVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGELLASGGDDAVILLWKVNDNKEAEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRILRVYSTQKKRVAFNVSKMLSGVGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVTNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFELRPAVEAEPGVELVSLPYRLVFAVASEDSVLLYDTQQLFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIRLKEKPVLCVRTPDTVKKTKSQTHPGSSPGPRLGEGTPSSRVRDPSSPSATPPQAKQSPAPTAAKDMPVTAPGARGFLAGPSEEKTLQPGSQNAKAHPSRRVTVNTLQAWSKSAPRRINLIPLKTDTPPNSIPTSVISSPSTEEIQPEMPGDLQVSPPELKRPRLSEHKEGPQCLDP*