Part of scaffold_412 (Scaffold)

For more information consult the page for scaffold_412 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCCB ENSTTRG00000010429 (Bottlenosed dolphin)

Gene Details

propionyl CoA carboxylase, beta polypeptide

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009894, Bottlenosed dolphin)

Protein Percentage 64.94%
cDNA percentage 70.02%
Ka/Ks Ratio 0.67741 (Ka = 0.2593, Ks = 0.3828)

PCCB ENSBTAG00000015221 (Cow)

Gene Details

Propionyl-CoA carboxylase beta chain, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020252, Cow)

Protein Percentage 65.91%
cDNA percentage 69.37%
Ka/Ks Ratio 0.2795 (Ka = 0.2982, Ks = 1.0668)

PCCB  (Minke Whale)

Gene Details

propionyl CoA carboxylase, beta polypeptide

External Links

Gene match (Identifier: BACU019719, Minke Whale)

Protein Percentage 65.91%
cDNA percentage 71.43%
Ka/Ks Ratio 0.68072 (Ka = 0.3418, Ks = 0.5021)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 945 bp    Location:603266..590037   Strand:-
>bmy_08884
ATGTCCGGAAGTAAGCGTAAAAGCAGCGGTGATGTAGTGGGTACTGCTAAGAAGTGCCAAGCGATAACAGTGGAAAGAAAAATGAAAATAATTGAGAGAGTGGAGCAAGGCAAAAAGATGGTAGACATCACTCATTCTTATAACATGAATTGTTCAACCATCTGCACAATTCTAAATAACAAGGACAAGATCATGGAACATGAAGTCTGCTGTGCTGATGATGTCAATAATACTATCGAAGAAGCATGGAAAAGTGATGGAGGAGATGAGAAACTTCTCAGTGTGTGGATGCAGGATCAGCACCAGTGTCGAGTCCTGTTCAGCTTAATGCTGATTCAGGAGAAAGCTAAAAGGCTTTATGAAGACTTGAAGAAGAAATACGGCGAAGAATCAGGGGGATGCTTGGACATTAATTCATCCGTGAAAGGGGCTCGTTTTGTCCGATTCTGTGACGCGTTCAATATTCCACTCATCACGTTTGTGGATGTCCCTGGCTTTCTCCCTGGCACCGCGCAGGAGTACGGGGGCATCATCCGGCACGGCGCCAAGCTTCTCTACGCGTTTGCCGAGGCAACTGTGCCCAAAGTGACAGTCATCACCAGGAAGGCCTATGGTGGCGCTTACGATGTCATGAGCTCCAAGCACCTTTGTGGTGACACCAACTACGCTTGGCCCACAGCAGAGATTGCAGTCATGGGAGCAAAGCTGGTGCGGTTGATCCAGGGCGCTGTGGAGATCATCTTCAAAGGGCACGAGAATGTGGAGGCCGCTCAGGCAGAGTACATCGAGAAGTTTGCCAACCCTTTTCCTGCAGCCGTGAGAGGGTTTGTGGATGACATCATCCAGCCTTCCTCTACACGTGCCCGAATCTGCTGTGACCTGGATGTCTTGGCCAGCAAGAAGGTACAGCGCCCATGGAGGAAACACGCAAATATTCCACTGTAA

Related Sequences

bmy_08884T0 Protein

Length: 315 aa      View alignments
>bmy_08884T0
MSGSKRKSSGDVVGTAKKCQAITVERKMKIIERVEQGKKMVDITHSYNMNCSTICTILNNKDKIMEHEVCCADDVNNTIEEAWKSDGGDEKLLSVWMQDQHQCRVLFSLMLIQEKAKRLYEDLKKKYGEESGGCLDINSSVKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVITRKAYGGAYDVMSSKHLCGDTNYAWPTAEIAVMGAKLVRLIQGAVEIIFKGHENVEAAQAEYIEKFANPFPAAVRGFVDDIIQPSSTRARICCDLDVLASKKVQRPWRKHANIPL*