Sequence details bmy_08888 (Coding sequence)

Part of scaffold_405 (Scaffold)

For more information consult the page for scaffold_405 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMB2 ENSTTRG00000007260 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006870, Bottlenosed dolphin)

Protein Percentage 63.7%
cDNA percentage 67.81%
Ka/Ks Ratio 0.69709 (Ka = 0.3971, Ks = 0.5697)

PSMB2 ENSBTAG00000002377 (Cow)

Gene Details

Proteasome subunit beta type-2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003072, Cow)

Protein Percentage 58.9%
cDNA percentage 64.84%
Ka/Ks Ratio 0.54506 (Ka = 0.431, Ks = 0.7907)

PSMB2  (Minke Whale)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 2

External Links

Gene match (Identifier: BACU009662, Minke Whale)

Protein Percentage 58.9%
cDNA percentage 67.12%
Ka/Ks Ratio 0.90268 (Ka = 0.4435, Ks = 0.4913)

Genome Location

Sequence Coding sequence

Length: 441 bp    Location:48081..53010   Strand:+
Raw sequence 
>bmy_08888
ATGGGCAAGGCCTGCTCACTAGCCACTGTGGCAAATGCAAGAGGAAAAACACACTTTGCAGAGAAAAAGGAAGTCATTTTACATGGGAGTCTCACCACTGATGCCTGGGAGCATAGACGGGCCATGACCCCATATCATGTCAACCTCCTCCTGGCTGGCTATGATGAGCATGAGGGTCCAGCGCTCTACTACATGGACTACCTGGCAGCCTTGGCAAAAGCCCCTTTTGCAGCCCATGGCTACGGTGCCTTCCTGACTCTCAGTATCCTGGACCGGTATTACACACCAGCTATCTCACGTGAGAAGGCAGTGGAACTTCTTAGGAAATGTCTGGAGGAGCCTAAGGATGAACTTGAATTCGTGGTCTACCAAGAGGCCGTATTAGTCCAGCAGCCCCAAGTGTTGCAAGGGGCTGCCAGGAAGAAGCCACTGGAATATTGA

Related Sequences

bmy_08888T0 Protein

Length: 147 aa      View alignments
>bmy_08888T0
MGKACSLATVANARGKTHFAEKKEVILHGSLTTDAWEHRRAMTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPAISREKAVELLRKCLEEPKDELEFVVYQEAVLVQQPQVLQGAARKKPLEY*