Part of scaffold_414 (Scaffold)

For more information consult the page for scaffold_414 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SDCBP2 ENSTTRG00000002740 (Bottlenosed dolphin)

Gene Details

syndecan binding protein (syntenin) 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002568, Bottlenosed dolphin)

Protein Percentage 93.93%
cDNA percentage 97.03%
Ka/Ks Ratio 0.51459 (Ka = 0.0262, Ks = 0.0508)

SDCBP2 ENSBTAG00000021321 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039107, Cow)

Protein Percentage 84.62%
cDNA percentage 88.26%
Ka/Ks Ratio 0.22968 (Ka = 0.0836, Ks = 0.3641)

SDCBP2  (Minke Whale)

Gene Details

syndecan binding protein (syntenin) 2

External Links

Gene match (Identifier: BACU018657, Minke Whale)

Protein Percentage 95.55%
cDNA percentage 98.25%
Ka/Ks Ratio 1.35011 (Ka = 0.019, Ks = 0.0141)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 741 bp    Location:138472..146098   Strand:+
>bmy_08907
ATGCCCGCCCTGCCGGGGCAGGCAGCAGACTCCCAGCCTTCAGTTTTGTACCCAAACCTGGCAGAATTGGAAAGTTATATGGGTCTTTCGTTCTCCAGCCACGAAGTCCAGCAGAACCTGCCTCAGATTCCAGAAGGTGCCAGTGCAGCGGTCTCGGGCCCCTCACCGGACCAGGTGGTGGCGCCGGTGTCCGGGAACAGCATGGGCGTGCTGCCTGGGGAGGTCAAGCCTGCGGTGCGCGAGATCCACCTGTGCAAGGACGAGCGCGGCAAGACGGGGCTGCGGCTGCGGGCCATCGACAAGGGGCTCTTTGTGCAGCTGGTCCAGGCCAACACCCCCGCGTCCCTGGTGGGGCTGCACTTTGGGGACCAGATCCTGCAGATTGACGGGCGCAACTGTGTCGGGTGGAGCACAGACAAAGCCCACCGGGTGGTGAAGAAGGCGTCGGCTGAGAAGATTGTCATGGTTGTTCGGGACAGGCCATTCCAGCGGACCGTCACCATGCACAAGGACAGCACAGGCCACGTCGGCTTCGCCATCAAGAAGGGGAAGGTCATCTCTTTGGTCAAAGGGAGTTCTGCGGCCCGCAATGGGCTCCTCATCAACCACTACGTGTGCGAGGTGAACGGGCAGAACGTCATTGGGCTGAAGGACAAAGAAGTCATGGAGATTCTGGCCATAGCCGGGAACGTCATCAACCTGGCCATCATCCCCACTGTGATCTATGAGCACATGGTCAGA

Related Sequences

bmy_08907T0 Protein

Length: 247 aa      View alignments
>bmy_08907T0
MPALPGQAADSQPSVLYPNLAELESYMGLSFSSHEVQQNLPQIPEGASAAVSGPSPDQVVAPVSGNSMGVLPGEVKPAVREIHLCKDERGKTGLRLRAIDKGLFVQLVQANTPASLVGLHFGDQILQIDGRNCVGWSTDKAHRVVKKASAEKIVMVVRDRPFQRTVTMHKDSTGHVGFAIKKGKVISLVKGSSAARNGLLINHYVCEVNGQNVIGLKDKEVMEILAIAGNVINLAIIPTVIYEHMVR