Part of scaffold_414 (Scaffold)

For more information consult the page for scaffold_414 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNPH ENSTTRG00000002741 (Bottlenosed dolphin)

Gene Details

syntaphilin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002569, Bottlenosed dolphin)

Protein Percentage 89.54%
cDNA percentage 90.59%
Ka/Ks Ratio 0.14513 (Ka = 0.0141, Ks = 0.0973)

SNPH ENSBTAG00000031278 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041815, Cow)

Protein Percentage 91.16%
cDNA percentage 91.24%
Ka/Ks Ratio 0.09168 (Ka = 0.0461, Ks = 0.5027)

SNPH  (Minke Whale)

Gene Details

syntaphilin

External Links

Gene match (Identifier: BACU015616, Minke Whale)

Protein Percentage 98.39%
cDNA percentage 98.66%
Ka/Ks Ratio 0.10264 (Ka = 0.0063, Ks = 0.061)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1494 bp    Location:160470..147477   Strand:-
>bmy_08908
ATGGCCATGTCCCTGCCAGGCAGTAGACGGGCCTCTGCTGGATCCCGCAGGCGCACCTCTCCCCCCGTGAGCGTGCGGGATGCCCACGGCACCTCTTCCCTCAGTAGCAGCAGTAACTCGGGCTCCTGCAAGGGAAGTGACAGCAGCCCCACGCCCAGGCGCGCCATGAAGTACACGCTGTGCAGTGACAACCATGGCATCAAGCCCCCCACCCCGGAGCAGTACCTGACCCCCCTGCAGCAGAAGGAGGTGTGCATCCGGCATCTGAAGGCCCGGCTGAAGGACACGCAGGACCGGCTCCAGGACCGGGACACGGAGATCGATGACCTGAAGATGCAGCTGTCGCGCATGCAGGAGGACTGGATCGAGGAGGAGTGCCACCGCGTGGAGGCCCAGCTGGCCCTGAAGGAGGCCCGCAAGGAGATCAAGCAGCTCAAGCAGGTCATCGACACCGTCAAGAACAGCCTGATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGACATCAACATCCAGAACAAGAAGCTGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGAACGGCTTCGCCAAGGAGGACGGCGCCGCTGAGTCGGCTGGCGGGTCCCCCGCCCGCTCCCTTACCCGTAGCTCCACCTACACAAAGCTGAGCGACCCCGCTGTCTGCGGCGACCGCCTGCCCGGTGACCACCCCGGCGTCTCTGTGGAGGACGGGGCTGACAGTGGCTTCGTGGCGACCGACGACACTCTGAGCCGGACGGATGCACTGGAGGCCAGCAGCCTGCTGTCTTCGGGGGTGGACTGCGGCCCTGAGGAAGGCTCCTCGCTGCACGGCTCCTTCAGCCTGGGCCCCCGCTTCCCCGCCAGCAACACCTACGAGAAGCTGCTGTGCGGCACGGAGGCTGGCGTGCAGGCCAGCTGCATGCAGGAGCGCGCCATCCAGACGGACTTCGTGCAGTACCAGCCGGACCTGGACACCATCCTGGAGAAAGTGACCAAGGCCCAGGTCTGCGGGACAGTCCCCAAGCCAGGGGACAGGTGCCTGGAGTCGGATCCCCACCCCCTGGGGCCCAGAGACCCCAACTCTGCAGTGGTGGTGATGGTGGGTGACGAGCTCGAGGCCCCGGAGCCCATCACCCGGGGGCCCACCCCACACCACCCTAGTGCCAACCCAAACCCCAGCCTGTCGGTGAGCGTGGCGTGCCCCGTGGAAGAGGAGGAGGAGGCGGCYGCAGCCGAGAAGGAGCCCAAGAGCTACTGGAGCCGCCACTACATCGTGGATCTGCTGGCGGTGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTCTGCCGCTCCCAGCGGCGCCAGGGCCAGCCCATTTACAACATCAGCTCCCTGCTGCGGGGCTGCTGCACCGTGGCCTTGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGAGCCAGCCGGGCCCAAGTGCCAGCACGGCAGGCGGCAGCTCCCAGCTCTGA

Related Sequences

bmy_08908T0 Protein

Length: 498 aa      View alignments
>bmy_08908T0
MAMSLPGSRRASAGSRRRTSPPVSVRDAHGTSSLSSSSNSGSCKGSDSSPTPRRAMKYTLCSDNHGIKPPTPEQYLTPLQQKEVCIRHLKARLKDTQDRLQDRDTEIDDLKMQLSRMQEDWIEEECHRVEAQLALKEARKEIKQLKQVIDTVKNSLIDKDKGLQKYFVDINIQNKKLETLLHSMEVAQNGFAKEDGAAESAGGSPARSLTRSSTYTKLSDPAVCGDRLPGDHPGVSVEDGADSGFVATDDTLSRTDALEASSLLSSGVDCGPEEGSSLHGSFSLGPRFPASNTYEKLLCGTEAGVQASCMQERAIQTDFVQYQPDLDTILEKVTKAQVCGTVPKPGDRCLESDPHPLGPRDPNSAVVVMVGDELEAPEPITRGPTPHHPSANPNPSLSVSVACPVEEEEEAAAAEKEPKSYWSRHYIVDLLAVVVPAVPTVAWLCRSQRRQGQPIYNISSLLRGCCTVALHSIRRISCRSLSQPGPSASTAGGSSQL*