Part of scaffold_414 (Scaffold)

For more information consult the page for scaffold_414 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBCK1 ENSTTRG00000005104 (Bottlenosed dolphin)

Gene Details

RanBP-type and C3HC4-type zinc finger containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004793, Bottlenosed dolphin)

Protein Percentage 98.63%
cDNA percentage 98.3%
Ka/Ks Ratio 0.07165 (Ka = 0.0056, Ks = 0.0784)

C20ORF18 ENSBTAG00000017002 (Cow)

Gene Details

ranBP-type and C3HC4-type zinc finger-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022612, Cow)

Protein Percentage 96.47%
cDNA percentage 93.07%
Ka/Ks Ratio 0.04142 (Ka = 0.0172, Ks = 0.4157)

RBCK1  (Minke Whale)

Gene Details

RanBP-type and C3HC4-type zinc finger containing 1

External Links

Gene match (Identifier: BACU015603, Minke Whale)

Protein Percentage 99.81%
cDNA percentage 99.61%
Ka/Ks Ratio 0.03845 (Ka = 0.0008, Ks = 0.0202)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1560 bp    Location:932832..914054   Strand:-
>bmy_08921
ATGGACGAGAAGATCAAGAAAGCTGAGGAGGTGGCCCAGAGACTCACCCGAGCAGTGGCTGGCGGGGATGAACAGGTGGCTATGCAGTGTGCCATATGGCTGGCAGAGCAACGGGTGCCCCTGAACGTGCAACTGAAGCCTGAGGTCTCCCCGACACAGGATATCAGGCTGTGGGTGAGCGTGGAGGATGCGCAGATGCACACGGTCACTATCTGGCTCACGGTGCGGCCTGACATGACGGTGGCCTCCCTCAAGGACATGGTGTTCCTGGACTATGGCTTTCCACCAACCCTGCAGCAGTGGGTGATTGGGCAGCGCTTGGCCCGGGACCAGGAGACCCTGCACTCCCACGGGGTGCGGCGGAACGGGGCCAGCGCCTACCTCTATCTGCTGTCAGCCTGCAACACCTCACTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGAGGATCTGGGCTTCAAGGACCTCACGCTGCAGCCACGGGGCCCCCTGGAGCCAGTCCCCCCGAAGCCCGGGGGCCCCCAGGAGCCGGGGCGGGGGCAGAACGACGCCGCGCCAGAGCCCCCGCCGGTGGGCTGGCAGTGCCCCGGTTGCACCTTCATCAACAAGCCCACGCGGCCCGGCTGCGAGATGTGCTGCCGGGCGCGGCCTGAGGCCTACCAGGTCCCCGCCTCGTACCAGCCGGACGAGGAGGAGCGAGCGCGTCTGGCCGGCGAGGAGGAGGCGCTGCGCCAGTACCAGCAGCGGAAGCAGCAGCAGCAGGAGGGGAACTACCTACAGCACGTGCAACTGGATCAGCGGAGCCTGGTGCTGAACACCGAGCCTACCGAGTGCCCCGTATGCTACTCGGTGCTGGCGCCCGGCGAGGCCGTGGTGCTGCGTGAGTGTCTGCACACCTTCTGCAGGGAGTGTCTACAGGGCACCATCCGCAACAGCCAGGAGGCCGAGGTTGCCTGCCCCTTCATTGACAACTCCTACTCATGCTCGGGCAAGCTGCTGGAGAGGGAGATCCGGGCGAGCACCAAGGTTGTGGTCTGCTGGCAGCTCCTGAGCCCCGAGGATTACCAGCGATTTCTGGACCTGGGCATCTCCATTGCGGAAAACCGCAGTGCCTTCAGCTACCACTGCAAGACCCCGGACTGCAAAGGATGGTGCTTCTTTGAGGATGATGTCAACGAATTCACCTGCCCTGTGTGTTTCCACGTCAACTGCCTGCTTTGCAAGGCCATCCACGAGCAGATGAACTGCAAGGAGTACCAAGACGACCTGGCCCTGCGGGCTCAGAACGACGTGGCTGCCCGGCAGACGACGGAGATGCTGAGGACCATGCTGCAGCAGGGCGAGGCCATGCACTGCCCACAGTGCCAGATCGTGGTGCAGAAGAAGGATGGCTGTGACTGGATCCGCTGCACTGTCTGCCACACGGAGATCTGCTGGGTCACCAAGGGTCCTCGCTGGGGCCCCGGGGGCCCAGGAGACACCAGCGGGGGCTGCCGCTGCCGGGTGAATGGGGCTCCTTGCCACCCCAGCTGTCAGAACTGCCACTGA

Related Sequences

bmy_08921T0 Protein

Length: 520 aa      View alignments
>bmy_08921T0
MDEKIKKAEEVAQRLTRAVAGGDEQVAMQCAIWLAEQRVPLNVQLKPEVSPTQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPTLQQWVIGQRLARDQETLHSHGVRRNGASAYLYLLSACNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPVPPKPGGPQEPGRGQNDAAPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEERARLAGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDNSYSCSGKLLEREIRASTKVVVCWQLLSPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQDDLALRAQNDVAARQTTEMLRTMLQQGEAMHCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGAPCHPSCQNCH*