Sequence detailsbmy_08921 (Coding sequence)

Part of scaffold_414 (SequenceType object (1))

For more information consult the page for scaffold_414 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBCK1ENSTTRG00000005104 (Bottlenosed dolphin)

Gene Details

RanBP-type and C3HC4-type zinc finger containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004793, Bottlenosed dolphin)

Protein Percentage 98.63%
cDNA percentage 98.3%
Ka/Ks Ratio 0.07165 (Ka = 0.0056, Ks = 0.0784)

C20ORF18ENSBTAG00000017002 (Cow)

Gene Details

ranBP-type and C3HC4-type zinc finger-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022612, Cow)

Protein Percentage 96.47%
cDNA percentage 93.07%
Ka/Ks Ratio 0.04142 (Ka = 0.0172, Ks = 0.4157)

RBCK1 (Minke Whale)

Gene Details

RanBP-type and C3HC4-type zinc finger containing 1

External Links

Gene match (Identifier: BACU015603, Minke Whale)

Protein Percentage 99.81%
cDNA percentage 99.61%
Ka/Ks Ratio 0.03845 (Ka = 0.0008, Ks = 0.0202)

Additional orthologs identified in other species via the OPTIC pipeline.

RBCK1 (Human)   Rbck1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1560 bp    Location:932832..914054   Strand:-
Raw sequence 
>bmy_08921
ATGGACGAGAAGATCAAGAAAGCTGAGGAGGTGGCCCAGAGACTCACCCGAGCAGTGGCTGGCGGGGATGAACAGGTGGCTATGCAGTGTGCCATATGGCTGGCAGAGCAACGGGTGCCCCTGAACGTGCAACTGAAGCCTGAGGTCTCCCCGACACAGGATATCAGGCTGTGGGTGAGCGTGGAGGATGCGCAGATGCACACGGTCACTATCTGGCTCACGGTGCGGCCTGACATGACGGTGGCCTCCCTCAAGGACATGGTGTTCCTGGACTATGGCTTTCCACCAACCCTGCAGCAGTGGGTGATTGGGCAGCGCTTGGCCCGGGACCAGGAGACCCTGCACTCCCACGGGGTGCGGCGGAACGGGGCCAGCGCCTACCTCTATCTGCTGTCAGCCTGCAACACCTCACTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGAGGATCTGGGCTTCAAGGACCTCACGCTGCAGCCACGGGGCCCCCTGGAGCCAGTCCCCCCGAAGCCCGGGGGCCCCCAGGAGCCGGGGCGGGGGCAGAACGACGCCGCGCCAGAGCCCCCGCCGGTGGGCTGGCAGTGCCCCGGTTGCACCTTCATCAACAAGCCCACGCGGCCCGGCTGCGAGATGTGCTGCCGGGCGCGGCCTGAGGCCTACCAGGTCCCCGCCTCGTACCAGCCGGACGAGGAGGAGCGAGCGCGTCTGGCCGGCGAGGAGGAGGCGCTGCGCCAGTACCAGCAGCGGAAGCAGCAGCAGCAGGAGGGGAACTACCTACAGCACGTGCAACTGGATCAGCGGAGCCTGGTGCTGAACACCGAGCCTACCGAGTGCCCCGTATGCTACTCGGTGCTGGCGCCCGGCGAGGCCGTGGTGCTGCGTGAGTGTCTGCACACCTTCTGCAGGGAGTGTCTACAGGGCACCATCCGCAACAGCCAGGAGGCCGAGGTTGCCTGCCCCTTCATTGACAACTCCTACTCATGCTCGGGCAAGCTGCTGGAGAGGGAGATCCGGGCGAGCACCAAGGTTGTGGTCTGCTGGCAGCTCCTGAGCCCCGAGGATTACCAGCGATTTCTGGACCTGGGCATCTCCATTGCGGAAAACCGCAGTGCCTTCAGCTACCACTGCAAGACCCCGGACTGCAAAGGATGGTGCTTCTTTGAGGATGATGTCAACGAATTCACCTGCCCTGTGTGTTTCCACGTCAACTGCCTGCTTTGCAAGGCCATCCACGAGCAGATGAACTGCAAGGAGTACCAAGACGACCTGGCCCTGCGGGCTCAGAACGACGTGGCTGCCCGGCAGACGACGGAGATGCTGAGGACCATGCTGCAGCAGGGCGAGGCCATGCACTGCCCACAGTGCCAGATCGTGGTGCAGAAGAAGGATGGCTGTGACTGGATCCGCTGCACTGTCTGCCACACGGAGATCTGCTGGGTCACCAAGGGTCCTCGCTGGGGCCCCGGGGGCCCAGGAGACACCAGCGGGGGCTGCCGCTGCCGGGTGAATGGGGCTCCTTGCCACCCCAGCTGTCAGAACTGCCACTGA

Related Sequences

bmy_08921T0 SequenceType object (3)

Length: 520 aa      View alignments
>bmy_08921T0
MDEKIKKAEEVAQRLTRAVAGGDEQVAMQCAIWLAEQRVPLNVQLKPEVSPTQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPTLQQWVIGQRLARDQETLHSHGVRRNGASAYLYLLSACNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPVPPKPGGPQEPGRGQNDAAPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEERARLAGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDNSYSCSGKLLEREIRASTKVVVCWQLLSPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQDDLALRAQNDVAARQTTEMLRTMLQQGEAMHCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGAPCHPSCQNCH*