Part of scaffold_413 (Scaffold)

For more information consult the page for scaffold_413 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDGFA ENSTTRG00000002641 (Bottlenosed dolphin)

Gene Details

platelet-derived growth factor alpha polypeptide

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002474, Bottlenosed dolphin)

Protein Percentage 97.96%
cDNA percentage 97.11%
Ka/Ks Ratio 0.066 (Ka = 0.0086, Ks = 0.1299)

BT.18780 ENSBTAG00000014541 (Cow)

Gene Details

platelet-derived growth factor subunit A precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019323, Cow)

Protein Percentage 96.68%
cDNA percentage 93.52%
Ka/Ks Ratio 0.03708 (Ka = 0.0138, Ks = 0.3722)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 771 bp    Location:217988..200846   Strand:-
>bmy_08934
CCGCCCTCCGCGCCACCCTCCTCCGGGCCGCGCTCCCTGAGGGATGGTACTGAATTTCGCCGCCACAGGAGCCCGGCTGGAGCGCCCGCCCCGCGGCCTCGCCACCCCGCCGAGCCGCCAGCGCCTCGGGACGCGATGAGGACCTGGGCTTGTTTGCTGCTCCTCGGCTGCGGATACCTCGCTAGTGCCCTGGCCGAGGAAGCCGAGATCCCCCGCGAGGTCATTGAGAGGCTGGCGCACAGTCAGATACACAGCATCCGGGACCTCCAGCGACTCCTGGAGATAGACTCCGTAGGGGCCGAGGAGCCTTTGGAGACGAGCCTGAGAGCCCACGGGGGCCATGGCGCCAAGCATGCGCCGGAGAAGCGGCCTGTGCCCATTCGGAGGAAAAGAAGCATCGAGGAAGCCATCCCCGCGGTCTGCAAGACCAGGACGGTCATTTACGAGATACCTCGGAGCCAGGTGGACCCCACGTCTGCCAACTTTCTGATCTGGCCTCCGTGCGTGGAGGTGAAGCGCTGTACCGGCTGCTGCAACACCAGCAGCGTCAAGTGCCAGCCGTCCCGCGTCCACCACCGGAGTGTCAAGGTGGCCAAGGTGGAGTACGTCAGGAAGAAGCCAAAGTTAAAAGAGGTGCAGGTGCGGCTGGAGGAGCATTTGGAGTGCACGTGCACGAGCGCCAGCCCGAGCCCCGACCACCGGGAAGAGGAGGCGGGAAGGCGTAGGGAGTCAGGTAAAAAACGGAAAAGAAAAAGGTTAAAACCCACCTAA

Related Sequences

bmy_08934T0 Protein

Length: 257 aa      View alignments
>bmy_08934T0
PPSAPPSSGPRSLRDGTEFRRHRSPAGAPAPRPRHPAEPPAPRDAMRTWACLLLLGCGYLASALAEEAEIPREVIERLAHSQIHSIRDLQRLLEIDSVGAEEPLETSLRAHGGHGAKHAPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECTCTSASPSPDHREEEAGRRRESGKKRKRKRLKPT*