Part of scaffold_417 (Scaffold)

For more information consult the page for scaffold_417 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CECR1 ENSTTRG00000009276 (Bottlenosed dolphin)

Gene Details

cat eye syndrome chromosome region, candidate 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008796, Bottlenosed dolphin)

Protein Percentage 94.57%
cDNA percentage 96.46%
Ka/Ks Ratio 0.33082 (Ka = 0.0251, Ks = 0.076)

CECR1 ENSBTAG00000017313 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023021, Cow)

Protein Percentage 82.2%
cDNA percentage 87.72%
Ka/Ks Ratio 0.28708 (Ka = 0.0939, Ks = 0.3271)

CECR1  (Minke Whale)

Gene Details

cat eye syndrome chromosome region, candidate 1

External Links

Gene match (Identifier: BACU007542, Minke Whale)

Protein Percentage 97.4%
cDNA percentage 98.07%
Ka/Ks Ratio 0.30633 (Ka = 0.0127, Ks = 0.0414)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1509 bp    Location:730944..754499   Strand:+
>bmy_08986
ATGTCCATGTCAGGGCRGCCAGCCCTGCCCACCCTGCTGCTGGCGGTGGCCGTGGCCGTGTCTTCTTTCTGCTCGGCCACATCCGGAGACGAAGCACGAAACCGGCTGTTGATGAGAGAGAAGATGATGCGGATTGGGGGGCAGCTGGTGCTGAAGCAGGAGGAGGAGCTGGCCAACCAGAGGCTCGGGGCCCTCAAGGAGGCCGAGATGCAGGAGGCCCTGAGGACGGGGAGCATCCCACCCAGCATGCACTTCTTCCAAGCCAAGAGCCTCATTGAGAAAAGGGCTGCCTTACACGTCCACGACTTCAGCATCGCCAGCACGGACTGGCTGGTGAGAAACGTCACCTACAGGCCCCACTGCTATTTCTGCCTCACCCCGAGGGGGACCCCGCAGTTCAGATTTGCTCGCTCGACTCCCCCCACCCTGAACACAACAGAATGTCCCCAGTGGGTTTTGCTGGAGAAGTTTCGAAAGGGGCTGCCGAACATCACCGAGTTTGACCACAGCCTGCTGAGGAATTTCACTCTGATGACCGAGAACCCCCAGGCGACTTATGCAAACCAAGACGCGGTCTGGGCCAAGTTCGAGACCATCTTCTTCGCGATCGCGGGCCTCGTGAGCTACGCCCCGGTATTCCGAGACTACATCTCGCAGGGCCTGGAGGAGTTCTACCAGGACAACGTGCTCTACCTCGAGCTCAGAGCCATGCTGTACCCGGTGTATGAACTGAACGGGACGGTCTACAGCCCAGAGTGGTCGGTGAGGTTGTACGAAGAAGTGGCTCGTAATTTTGCAAAAGAGCATCCTGGGTTTATTGGAATCAAACTCATTTATTCGGATCACAGGTCCAAAGGTGCATCCGCCATCGCGAAATCCATCCAGACAGCCATGGAACTTCGAGCCAAGTTCCCCGGGATGGTGGCGGGGTTTGACCTGGTGGGGCGAGAGGACACGGGCCACTCCCTGTATGACTACAAGGAGGTTTTGATGATTCCAGCCTCGCGGGGCATTAAGCTGCCTTACTTCTTCCACGCCGGAGAGACAGACTGGCAGGGTACTTCCGCAGACAGAAACGTTCTGGATGCCCTGTTACTGAACTCGACCAGGATTGGCCATGGGTTTGCTTTGAGCAAACACCCGGCCGTCTGGGCTGAGGCTTGGAAGAAGGACATCCCCATCGAAGTCTGTCCCATCTCCAACCAGGTTCTGAAGCTGGTGTCTGACCTGAGAAACCACCCTGCAGCCGTGCTGATGGCCACCGGGTACCCCATGGTCATCAGCTCTGATGACCCCGCTACTTTTGGAGCCAAAGGCTTGTCCTATGATTTCTACGAGGCCTTCATGGGCATCGGGGGGATGACGGCCGACCTGAGGACACTCAGACAGCTGGCCATGAACTCCATCAGGTACAGCGCCCTGTCGGAGACGGAGAAGAAGTTTGCCATGGCAACCTGGGAGGAGAGGTGGCAGAAGTTTGTGGCTGAGCTGGCAAGGGGCCCCAAGTGA

Related Sequences

bmy_08986T0 Protein

Length: 503 aa      View alignments
>bmy_08986T0
MSMSGXPALPTLLLAVAVAVSSFCSATSGDEARNRLLMREKMMRIGGQLVLKQEEELANQRLGALKEAEMQEALRTGSIPPSMHFFQAKSLIEKRAALHVHDFSIASTDWLVRNVTYRPHCYFCLTPRGTPQFRFARSTPPTLNTTECPQWVLLEKFRKGLPNITEFDHSLLRNFTLMTENPQATYANQDAVWAKFETIFFAIAGLVSYAPVFRDYISQGLEEFYQDNVLYLELRAMLYPVYELNGTVYSPEWSVRLYEEVARNFAKEHPGFIGIKLIYSDHRSKGASAIAKSIQTAMELRAKFPGMVAGFDLVGREDTGHSLYDYKEVLMIPASRGIKLPYFFHAGETDWQGTSADRNVLDALLLNSTRIGHGFALSKHPAVWAEAWKKDIPIEVCPISNQVLKLVSDLRNHPAAVLMATGYPMVISSDDPATFGAKGLSYDFYEAFMGIGGMTADLRTLRQLAMNSIRYSALSETEKKFAMATWEERWQKFVAELARGPK*