Part of scaffold_423 (Scaffold)

For more information consult the page for scaffold_423 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX2 ENSTTRG00000005635 (Bottlenosed dolphin)

Gene Details

sorting nexin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005318, Bottlenosed dolphin)

Protein Percentage 91.54%
cDNA percentage 90.53%
Ka/Ks Ratio 0.23833 (Ka = 0.0191, Ks = 0.0803)

BT.26946 ENSBTAG00000025358 (Cow)

Gene Details

sorting nexin-2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035453, Cow)

Protein Percentage 92.47%
cDNA percentage 92.67%
Ka/Ks Ratio 0.26642 (Ka = 0.0521, Ks = 0.1956)

SNX2  (Minke Whale)

Gene Details

sorting nexin 2

External Links

Gene match (Identifier: BACU013023, Minke Whale)

Protein Percentage 92.47%
cDNA percentage 93.78%
Ka/Ks Ratio 0.50915 (Ka = 0.055, Ks = 0.108)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 999 bp    Location:1045935..995203   Strand:-
>bmy_09017
ATGATTTTTAATAGTTTGACTTTTCTTGTAGGTGATGGCATGAATGCTTACATGGCTTATAGAGTAACAACAAAGACTTCTCTTTCYATGTTCAGTAAGAGTGAATTTTCAGTTAAAAGAAGATTTAGTGACTTTCTCGGTTTGCATAGCAAGTTAGCAAGCAAGTATTTACATGTCGGTTATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGCATGACCAAGGTCAAAGTGGGTAAAGAAGATTCATCATCCACAGAATTTGTAGAAAAACGAAGAGCAGCTCTTGAAAGGTATCTTCAAAGAACAGTAAAGCATCCGACTTTACTACAGGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCAGTTAATACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGCCGACGCTGTCAACAAAATGACAATCAAGATGAATGAATCGGATGCCTGGTTCGAAGAAAAGCAGCAGCAATTTGAAAATCTGGATCAGCAACTTAGGAAACTTCATGCCAGTGTTGAAGCCTTGGTCTGTCATAGAAAAGAACTTTCAGCCAACACAGCTGCCTTTGCTAAAAGTGCTGCCATGTTAGGTAATTCTGAAGATCATACTGCACTGTCTAGAGCTTTGTCTCAGCTTGCAGAGGTTGAGGAGAAGATAGACCAGTTACATCAAGAACAAGCTTTTGCTGACTTTTATATGTTTTCAGAACTACTTAGTGACTACATTCGTCTTATTGCTGCAGTGAAAGGTGTATTTGACCATCGAATGAAGTGCTGGCAGAAATGGGAAGAYGCTCAAATTACTTTGCTCAAAAAACGTGAAACTGAAGCAAAAATGATGGTTGCTAACAAACCAGATAAAATACAGCAAGCTAAAAATGAAATAAGAGAGGTGATTAATACAAAATGCTTTATTTATCTCTTTACCCAAATTTTCCATGACTCATTCATATATGCATAA

Related Sequences

bmy_09017T0 Protein

Length: 333 aa      View alignments
>bmy_09017T0
MIFNSLTFLVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSGAGILRMVNKAADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHASVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKRETEAKMMVANKPDKIQQAKNEIREVINTKCFIYLFTQIFHDSFIYA*