Part of scaffold_428 (SequenceType object (1))

For more information consult the page for scaffold_428 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IL1AENSTTRG00000011060 (Bottlenosed dolphin)

Gene Details

interleukin 1, alpha

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010482, Bottlenosed dolphin)

Protein Percentage 78.41%
cDNA percentage 89.52%
Ka/Ks Ratio 2.6198 (Ka = 0.1428, Ks = 0.0545)

IL1AENSBTAG00000010349 (Cow)

Gene Details

Interleukin-1 alpha

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013665, Cow)

Protein Percentage 79.1%
cDNA percentage 88.81%
Ka/Ks Ratio 1.00239 (Ka = 0.1248, Ks = 0.1245)

IL1A (Minke Whale)

Gene Details

interleukin 1, alpha

External Links

Gene match (Identifier: BACU017756, Minke Whale)

Protein Percentage 93.7%
cDNA percentage 97.53%
Ka/Ks Ratio 3.64398 (Ka = 0.0331, Ks = 0.0091)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 843 bp    Location:630391..620773   Strand:-
>bmy_09027
ATGGCCAAAGTCCCTGACCTCTTTGAAGACCTGAAGAACTGTTACAGTGAAAATGAAGAATACAGTTCTGAAATTGACCATCTGTCTCTGAATCAGCCTCTCAGTTTCCATTTTCCTTCCTCACAGAAGTCCTTCTATGATGCAAGCTATGAACCACTTCATGAGGACTGCATGGATAAATTTATATCTCTGAATACCTCTGAAACCTCTAAGACATCCAAGCTTACCTTCAAGGAAAATGTGGCGATGGTGTCAGCCAACGGGAAGATTCTGAAGAAGAGACGGTTGAGTTTAAATCAGTTCATCACCAATGATGACCTGGAAGACATTACTAAGGATACAGAAGAAGAAATCATCAAGCCCAGATCAGCACATTCCAGCTTCCAGAGCAACATGAAATACAACTTTGTGAGGGTCATCAGACAACAATGCATTCTGAATGACGCCCTCCATCAAAGTATAGTTCAAGATTCGTCGGGTCAATACCTCACGGCTGCTGCATTAAATAATCCGGATGAGGCAGTGAAATTTGACATGTGTGCTTATATACCAGAAGAGGATCATCAATGTCCTGTGACTCTAAGAATCTCAGAAACTCTACTGTTTGTGTGTGCTCAAAACGAAGACGAACCCATATTGCTAAAGGAGATGCCTGAGATACCCAAAACCATCGAAGATGAGACCAATCTCCTCTTCTTCTTGGAAGAGCATGGCACTATGTGCTACTTCAAATCAGTTGCCAATTCAGAGTTGTATTTGGCCACAAAGCAAGAAAAACTGGTGCACCTGGCAAGGGGCCTGCCCTCTATCACTGACTTTCAGATGTCGGAAAACCAGCCTTGA

Related Sequences

bmy_09027T0 SequenceType object (3)

Length: 281 aa      View alignments
>bmy_09027T0
MAKVPDLFEDLKNCYSENEEYSSEIDHLSLNQPLSFHFPSSQKSFYDASYEPLHEDCMDKFISLNTSETSKTSKLTFKENVAMVSANGKILKKRRLSLNQFITNDDLEDITKDTEEEIIKPRSAHSSFQSNMKYNFVRVIRQQCILNDALHQSIVQDSSGQYLTAAALNNPDEAVKFDMCAYIPEEDHQCPVTLRISETLLFVCAQNEDEPILLKEMPEIPKTIEDETNLLFFLEEHGTMCYFKSVANSELYLATKQEKLVHLARGLPSITDFQMSENQP*