Part of scaffold_428 (Scaffold)

For more information consult the page for scaffold_428 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IL1B ENSTTRG00000011069 (Bottlenosed dolphin)

Gene Details

interleukin 1, beta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010490, Bottlenosed dolphin)

Protein Percentage 90.57%
cDNA percentage 94.72%
Ka/Ks Ratio 0.62821 (Ka = 0.0477, Ks = 0.0759)

IL1B ENSBTAG00000001321 (Cow)

Gene Details

Interleukin-1 beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001745, Cow)

Protein Percentage 78.57%
cDNA percentage 86.97%
Ka/Ks Ratio 0.47498 (Ka = 0.1186, Ks = 0.2497)

IL1B  (Minke Whale)

Gene Details

interleukin 1, beta

External Links

Gene match (Identifier: BACU017757, Minke Whale)

Protein Percentage 94.66%
cDNA percentage 95.85%
Ka/Ks Ratio 0.42244 (Ka = 0.0328, Ks = 0.0775)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 846 bp    Location:683515..677364   Strand:-
>bmy_09028
ATGGTCACTCATTTTCTCCTCTTTACACAGGTTTCTGAAGCAGCCATGGCAACAGTACCCGAACCCACCAACGAAGTGATGGCTTACTACAGTGAGGAGGATGACCTGTTATTTGAGGCTGACGGCCCCAAACAGATGAAGTGCTGCGTCCAACACCTGGACCTCAGCTCCGTGGGAGATGGGAGCATCCAACTGCAAATCTCCCACCAGCTCTACAACAGGAGCTTCAGGCAGGTAGTGTCGGTCATCGTGGCCATGGAGAAGCTGAAGAGGATTCCCTGCTCACAGGCCTTCCAGGATGATGACCTGAGGAGCATCTTTTCACTCATCTTTGAAGAAGAGCCTGTCATCTTTGAAACGTACGCTGATGATTTTCTGTGCGACGCGGGTGTGCAGTCGCTGAACTGCAAACTCCAAGACAAAGAGCAAAAATCCCTGGTGCTGGCTAGCCCATGTGTGCTGAAGGCTCTCCACCTCCTCGCGCGGGACATGAACCGAGAAGTGATTTTCTGCATGAGCTTCGTGCAAGGAGATGAAAGTGATGACAAGATACCTGTGGCCTTAGGCCTCAAGGAAAAGAATCTATACCTGTCTTGTGTGATGAAAGGCGATAGGCCCACCCTGCAGCTGGAGGAGGTAGACCCCAAAACTTACCCAAAGTGGAATATGGAAAAGCGATTTGTCTTCAACAAGACAGAAGTCAAGAATAGAGTTGAATTTGAGTCTGCCCTGTACCCCAACTGGTACATCAGYACCTCTCAAGCAGAAGAAAAGCCCATCTTCCTAGGACGTTCCAAAGGCGGCCATGATATAACTGACTTCACCATGGAAATCATCTCTCCCTAA

Related Sequences

bmy_09028T0 Protein

Length: 282 aa      View alignments
>bmy_09028T0
MVTHFLLFTQVSEAAMATVPEPTNEVMAYYSEEDDLLFEADGPKQMKCCVQHLDLSSVGDGSIQLQISHQLYNRSFRQVVSVIVAMEKLKRIPCSQAFQDDDLRSIFSLIFEEEPVIFETYADDFLCDAGVQSLNCKLQDKEQKSLVLASPCVLKALHLLARDMNREVIFCMSFVQGDESDDKIPVALGLKEKNLYLSCVMKGDRPTLQLEEVDPKTYPKWNMEKRFVFNKTEVKNRVEFESALYPNWYISTSQAEEKPIFLGRSKGGHDITDFTMEIISP*