Part of scaffold_428 (Scaffold)

For more information consult the page for scaffold_428 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IL1RN ENSTTRG00000011846 (Bottlenosed dolphin)

Gene Details

interleukin 1 receptor antagonist

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011234, Bottlenosed dolphin)

Protein Percentage 82.25%
cDNA percentage 86.19%
Ka/Ks Ratio 0.5848 (Ka = 0.1389, Ks = 0.2375)

IL1RN ENSBTAG00000019665 (Cow)

Gene Details

Interleukin-1 receptor antagonist protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026209, Cow)

Protein Percentage 76.54%
cDNA percentage 82.3%
Ka/Ks Ratio 0.31472 (Ka = 0.1548, Ks = 0.4918)

IL1RN  (Minke Whale)

Gene Details

interleukin 1 receptor antagonist

External Links

Gene match (Identifier: BACU017764, Minke Whale)

Protein Percentage 84.85%
cDNA percentage 89.7%
Ka/Ks Ratio 0.39346 (Ka = 0.09, Ks = 0.2288)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 537 bp    Location:956565..968144   Strand:+
>bmy_09035
ATGTCTCCTGGGAGGAGGAACCACATTCTCCATCTAATGCCAGGAACATGGGTGGTACCACTGACGCCAACCAGAGAACGGAGATCTGAGAAGAGAGAACCCAAGACAGCCTGCTACCCCTTGGGAAAGAGACCCTTCGAGATGCAAGCCTTCAGAATCTGGGATGTCAACCAGAAGACCTTCTACCTGAGAAATAACCAGCTAGTTGCTGGACACTTGCAAGGACCAAATACTAAATTGGAAGAAAAGATAGATGTGGTGCCCGTCGAGCCCAGTGCTATGTTCCTGGGGATCCATGGGGGGAAGCTGTGCCTGGCCTGTCCGGTGAACATCACTGACCTGAGCAGGAACAAGGAGGAGGACAAGCGCTTCGCCTTCATCCGCTCCGACAGCGGGCCCACCACCAGCTTCGAGTCGGCCGCCTGCCCCGGCTGGTTCCTCTGTACAGCGCTGGAGACCGACCAGCCCGTGGGCCTCACCAATACGCCTCACGATGCTGTCCAGGTCACCAAGTTCTACTTCCAGCAGGACCAGTAG

Related Sequences

bmy_09035T0 Protein

Length: 179 aa      View alignments
>bmy_09035T0
MSPGRRNHILHLMPGTWVVPLTPTRERRSEKREPKTACYPLGKRPFEMQAFRIWDVNQKTFYLRNNQLVAGHLQGPNTKLEEKIDVVPVEPSAMFLGIHGGKLCLACPVNITDLSRNKEEDKRFAFIRSDSGPTTSFESAACPGWFLCTALETDQPVGLTNTPHDAVQVTKFYFQQDQ*