Part of scaffold_418 (Scaffold)

For more information consult the page for scaffold_418 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MFGE8 ENSTTRG00000005772 (Bottlenosed dolphin)

Gene Details

milk fat globule-EGF factor 8 protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005448, Bottlenosed dolphin)

Protein Percentage 94.33%
cDNA percentage 96.05%
Ka/Ks Ratio 0.3509 (Ka = 0.0185, Ks = 0.0526)

MFGE8 ENSBTAG00000003300 (Cow)

Gene Details

lactadherin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004272, Cow)

Protein Percentage 88.17%
cDNA percentage 90.33%
Ka/Ks Ratio 0.1893 (Ka = 0.0588, Ks = 0.3108)

MFGE8  (Minke Whale)

Gene Details

milk fat globule-EGF factor 8 protein

External Links

Gene match (Identifier: BACU016095, Minke Whale)

Protein Percentage 96.13%
cDNA percentage 98.02%
Ka/Ks Ratio 0.55669 (Ka = 0.0168, Ks = 0.0303)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location:40831..56585   Strand:+
>bmy_09048
CACGTGGCCCAGTGGGAGGTGCTGCGCTGCCTGATTTATTCCCGTCCAGGAGAAGGAGTGAGAACCGCCGGGTCTGAACAGCCCAAGCACCGGGTCTCGGGCCCACATCCCCACACCATGCCGGGCCCCCGTCTGCTGGCCGCGCTCTGCGGCGCGCTCCTCTGCGCCTCGGGACTCTTCGCCTTCTCCGGTGACTTCTGTGACTCCAGCCAGTGCCTGCATGGTGGGACCTGCTTGTTGGACCAGGACAGAAAACCCCCCTTCCACTGCCTCTGCCCTGAAGGCTTCACGGGCCTCATATGCAACGAGACTGAGAGAGGTCCCTGTTTCCCAAATCCCTGCCACAGTGGTGCCGAATGCCAGGTGATTGACGACTTCCACCGAGGGGATGTCTTCACCCAGTACATCTGCAAGTGCCCTCGTGGCTACACAGGCATCCACTGTGAGATCGTCTGCACCTCGCCGCTGGGCATGGAGACGGGCGCTATCGCCGACTCCCAGATCTCCGCCTCGTCCATGCACTTGGGTTTCATGGGTTTGCAGCGCTGGGCCCCGGATCTGGCCCGTCTGCACCTCACGGGCGTTGTCAACGCATGGACATCCAGCAACTACGATAGAAACCCCTGGATCCAGGTGAACCTGATGCGGAAGATGCGGGTGACGGGCGTGGTGACGCAGGGTGCTAGCCGCGCAGGCAGTGCCGAGTACCTGAAGACTTTCAAGGTGGCCTACAGCACCAATGGGCGCAAGTTCCAGTTCATCCAGGGTGCAGGGGAGTCAGGAGATAAGATATTTATGGGTAATGTGGACAACAGCGGCCTGAAGGTCAACCTGTTTGAAACCCCTCTGGAGGTGCAGTATGTGAGACTGGTGCCCATGATCTGCCACCGGGGCTGCACCCTTCGCTTTGAGCTCCTTGGCTGTGAGTTGAATGGATGCGCCGAACCCCTAGGCCTGAAGGACAACACCATCCCCAGCAAGCAGATCACAGCCTCCAGCTTCTACAAAACCTGGGGCCTCAGTGCCTTTAGCTGGTATCCCTCCTATGCGCGGCTGGATAATCAGGGCAAGTTCAACGCCTGGACCGCCCAGACCAACAGTGCCTCTGAGTGGCTGCAGATTGACCTGGGCTCTCAGAAGCGAGTGACCGGCATCATCACCCAGGGGGCCCGAGACTTTGGCCACATCCAGTATGTGGCAGCCTACAAGGTGGCCTATGGTGACAGTGGTGCGAACTGGACTGAGTACAGGGACCAGGGGGCCRTGGAAAGCAAGATCTTCCCTGGCAACATGGACAATAATTCCCACAAGAAGAACATGTTTGAGGCGCCTTTCCTGGCTCGCTTTGTGCGCATCCTGCCTGTGGCCTGGCACAACCGCATCACCCTTCGCGTGGAGCTGCTGGGCTGTTAG

Related Sequences

bmy_09048T0 Protein

Length: 471 aa      View alignments
>bmy_09048T0
HVAQWEVLRCLIYSRPGEGVRTAGSEQPKHRVSGPHPHTMPGPRLLAALCGALLCASGLFAFSGDFCDSSQCLHGGTCLLDQDRKPPFHCLCPEGFTGLICNETERGPCFPNPCHSGAECQVIDDFHRGDVFTQYICKCPRGYTGIHCEIVCTSPLGMETGAIADSQISASSMHLGFMGLQRWAPDLARLHLTGVVNAWTSSNYDRNPWIQVNLMRKMRVTGVVTQGASRAGSAEYLKTFKVAYSTNGRKFQFIQGAGESGDKIFMGNVDNSGLKVNLFETPLEVQYVRLVPMICHRGCTLRFELLGCELNGCAEPLGLKDNTIPSKQITASSFYKTWGLSAFSWYPSYARLDNQGKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVAAYKVAYGDSGANWTEYRDQGAXESKIFPGNMDNNSHKKNMFEAPFLARFVRILPVAWHNRITLRVELLGC*