Sequence details bmy_09049 (Coding sequence)

Part of scaffold_418 (Scaffold)

For more information consult the page for scaffold_418 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HAPLN3 ENSTTRG00000005769 (Bottlenosed dolphin)

Gene Details

hyaluronan and proteoglycan link protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005446, Bottlenosed dolphin)

Protein Percentage 69.08%
cDNA percentage 70.1%
Ka/Ks Ratio 0.25824 (Ka = 0.0155, Ks = 0.06)

BT.41613 ENSBTAG00000001740 (Cow)

Gene Details

hyaluronan and proteoglycan link protein 3 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002282, Cow)

Protein Percentage 90.56%
cDNA percentage 90.09%
Ka/Ks Ratio 0.09552 (Ka = 0.0448, Ks = 0.4692)

Additional orthologs identified in other species via the OPTIC pipeline.

HAPLN3 (Human)   Hapln3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location:57907..73319   Strand:+
Raw sequence 
>bmy_09049
GGGCTGGCCCGGCGGGAGAGCGGGGATTTGTTCGCCGCCGCTTCCTTTCTGGCCATTCAAGATCCCCAAATCCGCCTGCTTCCTCGGACCCGGTCAGCCCGCAGCCTGGAGCGCTCGAGCCGTCGAGGAGCTGCCTGGGGACGTTTGCCCCAGCCCCCAGCCTTCCCCGGGACGCCTGGGCGCTGCTGCGTGCATGACGCCATGGGCCTGCCGCTCCTGGTCCTGCTGCTTCCGCTGTGCTGCATCTCGGGCCTGCCCTTCTACAACGGCTTCTACTACTCCAATAGTCCCAACGGCTGGAACCCGGGCAAGGGCCACGGCGAAGGCATCTTCAATGGAGTGAAGCTGGTGGTAGAGACGCCTGAGGAGATCCTGTTCTCCTACCGTGGGGCCAACGTGACCCTGCCCTGCCGCTACCACTACGAGCCGGCCCTGGTCTCTCCTCGGCCCGTACGCATCAAATGGTGGAAACTGTCGGAGAATGGGGCCCCGGAGCAGGACGTGCTGGTGGTGATTGGGCTGAGGCACCGCGCCTTCGGAGACTACCGAGGCCGGGTGCATCTGTGGCAGGAGAGGGAGCGTGAAGTGTCACTGGAGATCCGGGACCTGAGGCTGGAGGACTATGGGCGCTACCGCTGCGAGGTCATTGATGGGCTGGAGGATGAGAGTGGCCTGGTGGAGCTGGAGCTGCGGGGTGTGGTCTTCCCTTACCAGCACCCCCAAGGGCGCTACCAGTTCAACTTCCACGAGGCCCAGTGGGCCTGCGAGGAACAGGACGCGGTGGTGGCCTCCTTTGAGCAGCTGTTCCGGGCCTGGGAGGAAGGCCTGGACTGGTGCAACGCAGGCTGGCTGCAGGACGCCTCTGTGCAGTACCCCATCACGCAGGCCCGACACCCCTGCGGTGGCCTGGGCCTGGCACCTGGCGTGCGCAGCTACGGCCCACGCCACCGCCGCCTGCACCGCTATGATGTGTTCTGCTTTGCTGCTGCCCTCAGGGGGGAGGTGTACTACCTGGAGCACCCTGAGAAGCTGACACTGGCAGAGGCAAAGGAGGCCTGCCAGGAAGACGGTGCCCAGATTGCCAAGGTGGGCCAGCTCTTTGCCGCCTGGAAGTTCCACGGCCTGGACCGTTGCGACGCTGGTTGGCTGGCAGATGGCAGTGCCCGCTACCCTGTGGCTCACCCACGTCACAACTGTGGGTCCCTGGAGCCTGGGGTCCGAAGCTTCGGTTTCCCAGACCCACATAGCCGCAAGTATGGCGTCTATTGCTACCGGCCGCGCTAG

Related Sequences

bmy_09049T0 Protein

Length: 428 aa      
>bmy_09049T0
GLARRESGDLFAAASFLAIQDPQIRLLPRTRSARSLERSSRRGAAWGRLPQPPAFPGTPGRCCVHDAMGLPLLVLLLPLCCISGLPFYNGFYYSNSPNGWNPGKGHGEGIFNGVKLVVETPEEILFSYRGANVTLPCRYHYEPALVSPRPVRIKWWKLSENGAPEQDVLVVIGLRHRAFGDYRGRVHLWQEREREVSLEIRDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQHPQGRYQFNFHEAQWACEEQDAVVASFEQLFRAWEEGLDWCNAGWLQDASVQYPITQARHPCGGLGLAPGVRSYGPRHRRLHRYDVFCFAAALRGEVYYLEHPEKLTLAEAKEACQEDGAQIAKVGQLFAAWKFHGLDRCDAGWLADGSARYPVAHPRHNCGSLEPGVRSFGFPDPHSRKYGVYCYRPR*