Part of scaffold_420 (Scaffold)

For more information consult the page for scaffold_420 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UCHL5 ENSTTRG00000009285 (Bottlenosed dolphin)

Gene Details

ubiquitin carboxyl-terminal hydrolase L5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008803, Bottlenosed dolphin)

Protein Percentage 76.24%
cDNA percentage 76.24%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0099)

UCHL5 ENSBTAG00000013620 (Cow)

Gene Details

Ubiquitin carboxyl-terminal hydrolase isozyme L5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018104, Cow)

Protein Percentage 99.09%
cDNA percentage 96.44%
Ka/Ks Ratio 0.02645 (Ka = 0.0041, Ks = 0.1545)

UCHL5  (Minke Whale)

Gene Details

ubiquitin carboxyl-terminal hydrolase L5

External Links

Gene match (Identifier: BACU014456, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.9%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0032)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:514088..565566   Strand:+
>bmy_09069
ATGACGGGCAATGCTGGGGAGTGGTGCCTCATGGAAAGCGACCCCGGGGTCTTCACCGAGCTCATTAAAGGATTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATGGAGTTTAGAGCCTGAGAATTTTGAAAAATTAAAGCCAGTTCATGGGCTGATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCAGCAGGCTCTGTGGTTCAGGACTCCAGACTTGACACGATATTTTTTGCCAAGCAGGTAATTAATAATGCTTGTGCTACTCAAGCCATAGTAAGTGTGTTATTGAACTGTACCCATCAAGATGTCCATTTAGGAGACACATTATCAGAGTTTAAAGAATTTTCACAAAGCTTTGATGCAGCTATGAAAGGTTTGGCACTGAGTAATTCGGATGTGATTCGACAAGTACACAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGATGCAAAGACATCAGCAAAAGAAGAAGATGCTTTTCACTTTGTCAGTTATGTTCCTGTTAATGGAAGACTGTATGAATTAGATGGATTAAGAGAAGGACCGATTGATTTAGGTGCATGCAATCAAGATGATTGGATCAGCGCAGTGAGGCCAGTCATAGAAAAAAGGATACAAAAGTACAGTGAAGGTGAAATTCGATTTAACTTAATGGCCATTGTGTCTGACAGAAAAATGATATATGAACAGAAGATAGCAGAGTTACAAAGACAACTTGCTGAGGAGGAACCCATGGATACAGATCAGGGTAATAACATGTTAAGTGCTATTCAGTCAGAGGTTGCCAAAAATCAGATGCTTATTGAAGAAGAAGTACAGAAATTAAAAAGATATAAGATTGAAAATATCAGAAGGAAGCATAATTATCTGCCGTTCATTATGGAATTGTTAAAGACTTTAGCAGAACACCAGCAGTTAATACCACTAGTAGAAAAGGCAAAAGAAAAACAGAATGCAAAGAAAGCACAGGAAACCAAATGA

Related Sequences

bmy_09069T0 Protein

Length: 330 aa      View alignments
>bmy_09069T0
MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGDTLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGNNMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQETK*