Part of scaffold_429 (Scaffold)

For more information consult the page for scaffold_429 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CACNA1D ENSTTRG00000012271 (Bottlenosed dolphin)

Gene Details

calcium channel, voltage-dependent, L type, alpha 1D subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011644, Bottlenosed dolphin)

Protein Percentage 81.39%
cDNA percentage 81.0%
Ka/Ks Ratio 0.22678 (Ka = 0.023, Ks = 0.1013)

BT.31482 ENSBTAG00000010026 (Cow)

Gene Details

voltage-dependent L-type calcium channel subunit alpha-1D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013226, Cow)

Protein Percentage 87.11%
cDNA percentage 85.96%
Ka/Ks Ratio 0.20436 (Ka = 0.0951, Ks = 0.4655)

CACNA1D  (Minke Whale)

Gene Details

calcium channel, voltage-dependent, L type, alpha 1D subunit

External Links

Gene match (Identifier: BACU005579, Minke Whale)

Protein Percentage 86.38%
cDNA percentage 88.56%
Ka/Ks Ratio 0.48573 (Ka = 0.1062, Ks = 0.2186)

Genome Location

Sequence Coding sequence

Length: 3903 bp    Location:575202..508860   Strand:-
>bmy_09136
ATGCCCACCAGTGAGACGGAGTCTGTGAACACGGAGAACGTGAGTGGGGAAGGCGAGAACCAAGGCTGCTGTGGGAGCCTCTGGTGGAGCCTGCCGCGGGCTGAGCCAGGTAACCCGGCAATTCCCCTGTGTCCACTAGGTGCTGGTGGAGAAGAAGAGGCGCCACCAAGGCTGGGCCCTCTGGGTGTCGGCGGTGGGGACGAGCTGGGCTGTAGCAGCGGGTGCACCAGCAGCGTGCAGCGTGCAGAGCATCGCCTGCTTTTGGGGGAGGCCCATGCGGTTTTGTTTGCTTTCTGCTGGTGTCCGTCAAGCCATCTCAAAATCCAAGCTCAGAAAGGGCACCTGATGACTCAGGAGTACTCAACGTCGACAGCTCTCTCCGGCTCCAGAGGAACCTCCAGATTTAAGAAAGGACTGAAAGTTTCCCTAAAAGGAAAACTCGGGTTTGGGAGCACTTCGCTGCCTGGTAAATTCCGCATGATGATTGAGGTGCTGCGAGAGATGTGGAGTGACGTTTGCTTCTCTTGCAGCCGCCGCTGGCGCCGCTGGAACCGCTTCAGTCGCAGGAGGTGCAGGGCTGCCGTGAAGTCCGTCACGTTTTACTGGCTGGTGATTGTCCTGGTGTTTCTCAACACCTTAACCATTTCCTCCGAGCACTACGACCAGCCCGACTGGTTGACACAGATTCAAGATATCGCTAACAAAGTCCTCTTGGCTCTGTTCACCTGCGAGATGCTTGTAAAGATGTACAGCTTGGGTCTCCAGGCATATTTCGTCTCTCTTTTCAATCGGTTTGATTGCTTCGTGGTGTGTGGAGGAATTACTGAAACGATCTTGGTGGAACTGGAAATCATGTCTCCTCTGGGCATCTCTGTGTTTCGCTGTGTTCGGCTCTTGAGAATTTTCAAAGTGACCAGGCACTGGACCTCCCTGAGCAACTTGGTGGCATCCTTGTTAAACTCCATGAAGTCCATCGCTTCGCTGCTGCTTCTGCTTTTTCTCTTCATCATCATCTTTTCCTTGCTGGGGATGCAGCTGTTCGGCGGCAAGTTTAATTTTGACGAAACGCAAACCAAGCGGAGCACCTTTGATAATTTCCCTCAAGCGCTTCTAACGGTGTTCCAGATTCTGACGGGTGAAGACTGGAATGCTGTGATGTATGATGGCATTATGGCGTACGGGGGCCCGTCGTCTTCGGGAATGATCGTCTGCATCTACTTCATCATCCTCTTCATTTGCGATATTCTACTGAATGTCTTCTTGGCCATCGCTGTAGACAATTTGGCTGATGCTGAAAGTTTGAATACTGCTCAGAAAGAGGAAGCTGAAGAAAAGGAAAGGAAGAAGATTGCCAGAAAAGAAAGCCTGGAAAATAAAAAGAACAACAAACCAGAAGTCAACCAGATAGCCAACAGTGACAACAAGGTCACCATCGATGACTACCGAGAAGAGGATGAGGACAAGGACCCCTACCCGCCTTGTGATGTGCCAGTAGGTGAAGAGGAAGAGGAGGAGGAAGAGGATGAACCCGAGGTTCCTGCTGGCCCCCGTCCTCGCAGAATCTCTGAGTTGAACATGAAAGAGAAAATCACCCCCATCCCCGAAGGGAGCGCTTTCTTCATTCTTAGCAAGACCAACCCGATCCGCGTGGGCTGCCACAAGCTCATCAACCACCACATCTTCACCAACCTTATCCTCGTCTTCATCATGCTGAGCAGCGCTGCCCTCGCCGCCGAGGACCCCATCCGCAGCCACTCCTTCCGGAACACTATACTGGGTTACTTTGACTATGCTTTCACAGCCATCTTTACTGTTGAAATCCTGTTAAAGATGACGACTTTTGGAGCTTTCCTCCACAAAGGGGCTTTCTGCAGGAACTACTTCAACTTACTGGATATGCTGGTCGTTGGGGTGTCTCTGCACGTGGTCCAGTGCGTCTTTGTGGCCATCCGGACAATTGGCAACATCATGATCGTCACCACCCTCCTCCAGTTCATGTTTGCCTGCATCGGGGTGCAGCTCTTCAAGGGAAAGTTTTATCGATGCACAGATGAAGCCAAAAGTAACCCCGAAGAATGCAGGGGGCTCTTCATCCTCTACAAGGATGGGGATGTCGATAACCCTGTGGTCCGTGAGAGGATCTGGCAAAACAGCGATTTCAACTTTGACAACGTCCTCTCAGCTATGATGGCTCTGTTCACGGTCTCCACGTTCGAGGGCTGGCCCGCGTTGCTGTACAAAGCCATTGACTCGAACGGAGAGAACGTCGGACCCATCTACAACTACCGCGTGGAGATCTCCATCTTCTTCATCATCTACATCATCATCGTAGCGTTCTTCATGATGAACATCTTTGTGGGCTTCGTCATCGTCACGTTTCAGGAGCAGGGGGAGAAAGAGTATAAGAACTGTGAGCTGGACAAAAATCAGCGTCAGTGTGTTGAATACGCCTTGAAAGCACGTCCCTTGCGGAGATACATCCCCAAAAACCCCTACCAGTACAAGTTCTGGTACGTGGTGAACTCCTCGCCTTTCGAATACATGATGTTTGTCCTCATCATGCTCAACACACTCTGCTTGGCCATGCAGCACTACGAGCAGTCCAAGATGTTTAATGACGCCATGGACATCCTGAACATGGTCTTCACCGGGGTGTTCACTGTCGAGATGGTTTTGAAAGTCATCGCGTTTAAACCTAAGGGGTACTTTAGTGATGCCTGGAACACGTTTGACTCCCTCATCGTAATCGGCAGCATTGTAGACGTGGCGCTCAGCGAAGCCGACGTGATGTTGCATGTTCTACTTTCCATTGGGTTTGACCTCTCCATGATAACCCTTCAGAACTCTGAAGAGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTTTCCGAGTGATGCGATTGGTGAAGCTTCTCAGCAGGGGGGAAGGCATCCGGACACTGCTGTGGACTTTTATTAAGTCCTTCCAGGCGCTCCCGTATGTCGCCCTTCTCATCGCCATGCTGTTCTTCATCTACGCCGTTATCGGCATGCAGATGTTTGGGAAAGTTGCCATGAGAGATAACAACCAGATCAACAGGAACAACAATTTCCAGACCTTTCCCCAGGCCGTGTTGCTGCTCTTCAGGTGTGCGACGGGGGAGGCCTGGCAGGAAATCATGCTGGCCTGCCTCCCGGGAAAGCTCTGTGACCCCGAGTCCGATTACAACCCCGGGGAGGAGTACACCTGTGGGAGCAACTTCGCCATTGTTTATTTCATCAGTTTTTACATGCTCTGCGCATTTCTGATCATCAACCTGTTTGTGGCTGTCATCATGGACAATTTCGATTATCTGACCCGGGACTGGTCTATTCTGGGGCCTCACCATTTAGACGAATTCAAAAGAATATGGTCCGAATATGACCCCGAGGCAAAGGGAAGAATCAAGCACCTGGACGTGGTCACTCTGCTCCGCCGCATCCAGCCCCCCCTGGGGTTTGGGAAATTGTGTCCACACAGGAGACTAGTTGCCATGAACATGCCGCTCAACAGTGATGGGACAGTCATGTTTAATGCAACTCTGTTTGCTTTGGTCCGAACGGCTCTTAAAATCAAGACGGAAGGGAACCTGGAACAAGCTAATGAAGAACTCCGAGCTGTGATCAAGAAAATCTGGAAGAAAACCAGCATGAAACTACTTGACCAAGTTGTCCCTCCAGCTGGTGATGATGAGGTAACCGTGGGGAAGTTCTATGCCACTTTCCTGATACAGGACTACTTTAGGAAATTCAAGAAACGGAAAGAACAAGGACTGGTGGGAAAATACCCCGCGAAGAACAGCACAATTGCCCTACAGGTGAATTGTTGTTTTGTCTTTTTCTCCTTTTCACTAACGATTTTACGAGCTTATTTGAAATACTAG

Related Sequences

bmy_09136T0 Protein

Length: 1301 aa      View alignments
>bmy_09136T0
MPTSETESVNTENVSGEGENQGCCGSLWWSLPRAEPGNPAIPLCPLGAGGEEEAPPRLGPLGVGGGDELGCSSGCTSSVQRAEHRLLLGEAHAVLFAFCWCPSSHLKIQAQKGHLMTQEYSTSTALSGSRGTSRFKKGLKVSLKGKLGFGSTSLPGKFRMMIEVLREMWSDVCFSCSRRWRRWNRFSRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYDQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICDILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKITPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDNPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIVDVALSEADVMLHVLLSIGFDLSMITLQNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNSTIALQVNCCFVFFSFSLTILRAYLKY*