Part of scaffold_429 (Scaffold)

For more information consult the page for scaffold_429 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000002310 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002162, Bottlenosed dolphin)

Protein Percentage 87.97%
cDNA percentage 88.56%
Ka/Ks Ratio 0.28036 (Ka = 0.0126, Ks = 0.045)

RFT1 ENSBTAG00000020973 (Cow)

Gene Details

protein RFT1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053575, Cow)

Protein Percentage 90.93%
cDNA percentage 91.98%
Ka/Ks Ratio 0.27538 (Ka = 0.0502, Ks = 0.1824)

RFT1  (Minke Whale)

Gene Details

RFT1 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU005576, Minke Whale)

Protein Percentage 96.25%
cDNA percentage 97.11%
Ka/Ks Ratio 0.48669 (Ka = 0.0235, Ks = 0.0483)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1524 bp    Location:1120819..1158605   Strand:+
>bmy_09141
ATGCGCCCCCGGGAGGTGCTGGGCCAGGCGGTCCGGCTGGCCTCCTCTGGTCTCCTCCTGCAGGTGTTGTTTCGATTGATCACCTTTGTCTTAAATGCATTTATTCTTCGCTTCCTGTCAAAGGAAATCGTTGGCATAGTGAATGTCAGGCTAACACTGCTTTACTCTACCACCATCTTCCTGGCCAGAGAGGCCTTCCGCAGAGCATGTCTGAGTGGCAGCACCCAGCGGGACTGGAGCCAGACCCTCAACCTCCTGTGGCTAACAGTCCCTTTGGGTGTGTTTTGGTCCGTGTTCCTGGGCTGGGCCTGGCTACAGTTGCTTGCAGTGCCCGATCCTGACGTCATCCCCCACTATGGAACTGGAGTGGTGTTGTTTGGGTTCTCGGCAGTGGTGGAACTTCTGGGAGAGCCCTTCTGGGTCTTGGCACAAGCACATATGTTTGTCAAGCTCAAGCTTTTCTATACTGCAGTTCTCGTGCTCTGCTATGTTATTTATTTCACAAAGTTACTGGGCTCCCCAGAATCAGCCAAGCAACAAGTTCTTCCTGTCTCCAGAATGACAGATATGTTACCCAATATTACGAGAAGTAGAGCTTTTGTAAATTGGGAAGAGGCTAAATTGACTTGGAGTTTCTTCAAACAGTCTTTCTTGAAACAGATTTTGACAGAAGGCGAGCGATATGTGATGACATTTTTGAACGTGTTAAATTTTGGGGATCAGGGCGTGTATGATATAGTGAATAATCTTGGCTCCCTTGTGGCAAGATTAATTTTCCAGCCAATAGAAGAGAGTTTTTATATATTCTTTGCTAAGGTGCTGGAGAGAGAAAAGGATGCCATACTTCAGAAGGAGGAGGACGTTGCTGTGGCCGCTGCGGTTTTGGAGTCCCTGCTAAAGCTGGCCCTGCTCACTGGCCTGACCATCTCTGTTTTCGGCTTTGCCTATTCTCAACTGGCTTTGGACATCTATGGAGGGGCCATGCTTAGCTCAGGATCAGGTCCTGTCCTGCTGCGTGCCTATTGTCTTTACGTCCTCCTGCTTGCCATCAATGGAGTGACCGAGTGTTTCACATTTGCTGCCATGAGCAAAGAGGAGGTCGACAGGTACAATTTCACAATGCTGGCCCTCTCATCTTCGTTCCTGCTGTTAGCCTATCTCCTGACCCATTGGTGTGGCAGCGTGGGCTTCATCTTGGCCAACTGCTTCAACATGGGCATTCGGATCACACACAGCCTTTGCTTCATCCACCACTACTACCGGAAGAGCCCCCACAAGCCCCTGGCCGGCCTGTTCCTGTCGCCAGTCCTCCTCGGGGCATTTGCCCTCAGTGGTGGCATTACTGCTGTTTCCGAGGTGTTCCTCTGCTGTGAGCGGGGCTGGCCAGCCATGCTGTTGCACGTCGCTGTGGGGGCCCTCTGTTTGGGAGCGACTCTTGGGACAGCGTTCCTCACAGAGACCAAGCTGATCCACTTTCTTAGGACTCAGTTAGGTGTGTCGAGACTCACTGACAAAACGACATGA

Related Sequences

bmy_09141T0 Protein

Length: 508 aa      View alignments
>bmy_09141T0
MRPREVLGQAVRLASSGLLLQVLFRLITFVLNAFILRFLSKEIVGIVNVRLTLLYSTTIFLAREAFRRACLSGSTQRDWSQTLNLLWLTVPLGVFWSVFLGWAWLQLLAVPDPDVIPHYGTGVVLFGFSAVVELLGEPFWVLAQAHMFVKLKLFYTAVLVLCYVIYFTKLLGSPESAKQQVLPVSRMTDMLPNITRSRAFVNWEEAKLTWSFFKQSFLKQILTEGERYVMTFLNVLNFGDQGVYDIVNNLGSLVARLIFQPIEESFYIFFAKVLEREKDAILQKEEDVAVAAAVLESLLKLALLTGLTISVFGFAYSQLALDIYGGAMLSSGSGPVLLRAYCLYVLLLAINGVTECFTFAAMSKEEVDRYNFTMLALSSSFLLLAYLLTHWCGSVGFILANCFNMGIRITHSLCFIHHYYRKSPHKPLAGLFLSPVLLGAFALSGGITAVSEVFLCCERGWPAMLLHVAVGALCLGATLGTAFLTETKLIHFLRTQLGVSRLTDKTT*