Part of scaffold_422 (Scaffold)

For more information consult the page for scaffold_422 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS18 ENSTTRG00000011461 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 18 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010866, Bottlenosed dolphin)

Protein Percentage 99.08%
cDNA percentage 98.36%
Ka/Ks Ratio 0.09676 (Ka = 0.0054, Ks = 0.056)

VPS18 ENSBTAG00000011567 (Cow)

Gene Details

vacuolar protein sorting-associated protein 18 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015368, Cow)

Protein Percentage 97.84%
cDNA percentage 94.18%
Ka/Ks Ratio 0.04038 (Ka = 0.011, Ks = 0.2731)

VPS18  (Minke Whale)

Gene Details

vacuolar protein sorting 18 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU008518, Minke Whale)

Protein Percentage 98.97%
cDNA percentage 98.73%
Ka/Ks Ratio 0.15767 (Ka = 0.0058, Ks = 0.0368)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2922 bp    Location:957336..948978   Strand:-
>bmy_09174
ATGGCGTCTATCCTGGATGAATACGAGGACTCCCTCTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCCAGCGTCGGCATCCCCCACTCGGGATATGTGAATGCCCAGCTAGAGAAGGAAGTGCCCATTTTCACGAGGCAGCGCATTGACTTTACCCCTTCTGAGCGTATCACCAGTCTTGTCGTCTCCTGCAATCAGCTCTGCATGAGCCTGGGCAAGGATACACTACTCCGATGCACTGGAGGCAAAGCAAATGAACCCAACCACGTGGAGCTGGGGCGCAAGGATGATGCCAAAGTTCACAAGATGTTCCTGGACCCTACTGGCTCTCACCTGCTGATCGCTCTGAGCAGCACTGAGGTCCTCTACGTGAACCGTAATGGACAGAAAGTTCGGCCCCTGGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGCTGGAACAAGGCCCTGGGTACTGAGAGCAGCACAGGCCCCATCCTGGTCGGCACTGCCCAAGGCCAGATCTTTGAAGCAGAGCTCTCGGCCAGTGAGGGTGGGCTTTTCGGCCCTGCCCCGGATCTCTACTTCCGTCCGTTGTATGTGCTAAATGAAGAAGGGGGCCCAGCACCTGTGTGCTCCCTCGAGGCGGAGCGGGGCCCTGAAGGGCGTGGCTTTGTCATCGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCCGAGGGAGCTGAGGCCCAAGGCTTCTCGGGGCTCTTTGCTGCCTACACTGACCACCCACCCCCATTCCGTGAGTTCCCCAGCAGTCTGGGCTACAGTGAGCTGGCCTTCTACACCCCCAAGTTGCGCTCTGCGCCCCGGGCCTTCGCCTGGATGATGGGGGATGGCGTGTTGTATGGCTCGTTGGACTGCGGGCGTCCCGACTCCCTGCTGAGCGAGGAGCGGGTCTGGGAGTACCCAGAGGGGGTGGGTCCTGGGGCCAGCCCACCCCTGGCCATCGTCCTGACCCAGTTCCACTTCCTGCTGCTGCTKGTGGACCGGGTGGAGGCGGTGTGCACACTGACGGGGCAGGTGGTGCTGCGGGACCACTTCCTGGAGAAGTTTGGGCCGCTGAAGCACATGGTGAAGGACTCCTCCACGGGCCATCTGTGGACCCACACCGAGCGGGCCGTCTTCCGCTACCAGGTACAGCGGGAGGCCCGGGATGTCTGGCGCACCTACCTGGACATGAACCGCTTCGACCTGGCCAAAGAGTATTGTCGAGAGCGGCCTGACTGCCTGGACACGGTCCTGGCCCGGGAGGCCGACTTCTGCTTCCGCCAGCATCGTTACCTGGAGAGTGCCCGCTGCTACGCCCTGACTCAGAGCTACTTTGAGGAGATTGCCCTCAAGTTCTTGGAGGCCCACCAGGAGGAGGCGCTGGCCGAGTTCCTGCAGCGAAAACTGGCCAGTTTGAAGCCTGCTGAGCGCACCCAGGCCACGCTGCTTACCGCCTGGCTGACRGAGCTCTACCTGAGCCGACTCGGGGCCCTGCAGGGTGACCCTGAGGCCCTGAACCTCTACCGGGAAACCCGGGAGCGTTTCCGCGCCTTCCTAAGCAGCCCCCGCCGCAAGGAGTGGCTCTTCGCCAGCCGGGCCTCCATCCACGAGCTGCTCGCCAGCCACGGGGACACAGAGCACATGGTGTACTTCGCTGTGATCATGCAGGACTACGAGCGCGTGGTGGCATACCACTGCCAGCATGAGGCCTACGAGGAGGCCCTGGCCGTGCTGGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCCATCCTCATCCGTCACATCCCTCGCCAGCTGGTGGACGCCTGGATTGAGCTGGGCAGCCGGCTGGATGCCCGGCAGCTCATCCCTGCCCTGGTGAACTATAGCCAGGGTGGCGAGGCCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGCGAGACTGAGCAGGCCATTCACAATTACCTGCTGTCGCTCTATGCCCGAGGCCAGCCAGCCTCGCTGCTGGCCTACCTCGAGCAGGCCGGGGCCAGCCCGCACCGGGTGCATTATGACCTCAAGTACGCGCTGCGGCTCTGTGCTGAGCATGGCCACCACCATGCTTGCGTCCACGTCTACAAGGTCCTGGAGCTGTATGAGGAGGCTGTGGACCTGGCCCTGCAGGTGGACGTGGACCTGGCCAAGCAGTGTGCTGACCTGCCCGAGGAAGATGAGGAGCTGCGCAAGAAGCTGTGGCTGAAGATCGCTCGGCATGTGGTGCAGGAGGAGGAGGATGTGCAGACGGCCATGGCCTGCCTGGCCAGCTGCCCCCTGCTCAAGATCGAGGACGTGCTGCCTTTCTTCCCTGACTTCGTCACCATCGACCACTTCAAGGAGGCGATCTGCAGCTCGCTGAAGGCTTACAACCACCACATCCAAGAGCTGCAGCGGGAGATGGAAGAGGCCACGGCCAGCGCCCAGCGCATCCGGCGAGACCTGCAGGAGCTGCGGGGCCGCTATGGTACCGTGGAGCCCCAGGACAAATGTGCCACCTGCGACTTCCCCCTGCTCAACCGCCCTTTTTACCTCTTCCTCTGTGGCCACATGTTCCACGCTGACTGCCTGCTGCAGGCTGTGCGGCCTGGCCTGCCGGCCTACAAGCAGGCCCGGCTCGAGGAGCTACAGCGAAAGCTGGGCGCCGCTCCACCCCCTGCCAAGGGCTCTGCCCGGGCTAAGGAGGCCGAGGGGGGCGCTGCCACCGGGGGGCCCAGCCGGGAACAGCTCAAGGCTGACCTGGATGAACTGGTGGCCGCTGAGTGCGTGTACTGTGGGGAACTGATGATCCGCTCTATTGACCGGCCCTTCATCGACCCTCAGCGCTACGAGGAGGAGCACCTCAGTTGGTTGTAG

Related Sequences

bmy_09174T0 Protein

Length: 974 aa      View alignments
>bmy_09174T0
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTRQRIDFTPSERITSLVVSCNQLCMSLGKDTLLRCTGGKANEPNHVELGRKDDAKVHKMFLDPTGSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLVDRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGHLWTHTERAVFRYQVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEAHQEEALAEFLQRKLASLKPAERTQATLLTAWLTELYLSRLGALQGDPEALNLYRETRERFRAFLSSPRRKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHHACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL*