Part of scaffold_434 (Scaffold)

For more information consult the page for scaffold_434 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RP1L1 ENSTTRG00000015518 (Bottlenosed dolphin)

Gene Details

retinitis pigmentosa 1-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014723, Bottlenosed dolphin)

Protein Percentage 82.67%
cDNA percentage 87.89%
Ka/Ks Ratio 0.59455 (Ka = 0.0761, Ks = 0.128)

RP1L1 ENSBTAG00000020155 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054813, Cow)

Protein Percentage 71.23%
cDNA percentage 82.25%
Ka/Ks Ratio 0.54723 (Ka = 0.1776, Ks = 0.3246)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5664 bp    Location:517760..506980   Strand:-
>bmy_09203
ATGTCCCGAGAGAAGAGGGTTTCGGGACAACTTGGCTGGCCGGTGCACAGAACAGAGCGCCATGTGGTGACCTGGGCAGGAATAGCCTGCAGCTGGCTTTTGCAAGAGTCCCAGATGAGGCAATGGGGCTCCACCATGGCGGGAATAGAAGCGAACAGTTGGACGAATGGCCTTGACCCCGCACAGCTGGCCTGCAGCCCTATCTCCCACGCCGGTGGCAGCAGGCTGTGGTACTCACCCGTACGCTGCCTGGTCCTCCACACCATGAACAGCACCCCGAGGGATGCCCAGGCCCCCGGACACCGCGAGTGCCTCCTGCCTTCTGTGGCCCGGACCCCCTCTGTCTCCCAGGTCATGCCAGCCAAGAAGATAACTTTCCTCAAGCGAGGGGATCCCCAGTTTGCTGGGGTTCGCCTGGCCGTTGACCGACGCGCCTTCAGGAGCTTCGGGGCCCTGATGGATGAGCTCTCTCAGCGCGTGCCGCTCTCCTTTGGGGTGCGCTCCGTCACCACGCCCCGGGGCCTGCACGGCCTCAGCACCCTGGAGCAGCTGCAAGATGGTGGCTGCTACCTCTGCTCCGATAAGAAGCCCCCCAAGACCCCCAGCGGGCCGGGCCGGCCACGGGCGAGAAGCCCTTCTCAGCAGTCACGGGATTTTGAAGGCTGCTGCGAGGCACCTGGAACAGCTTCTTCCTGCAAAAGTCTCAGAGCCCCGAGGAGGGTAACGCTGGTTAAGAACGGCGACCCTCGATACCAGCAGGCAGTGGTGCTCAGTCACAGAAACACCAGGAACCTGACGGCCTTTCTCAGCAAAGCCTCGGATCTGCTGCGCTTCCCCGTGAAGCAAGTGTACACAACCGGTGGGCAAAAGCATACCCTTCTAATTGGAGAAAACGAAAAAGAGCAGATTCTGTACTTTAAAGATGGAACGAAATCCCCCAACATCGCTAATTATGATGTGGACTCTCTGAAGGGTCTGCTACACAGCCCCTCGGTGCTGGTATGTGCCGGTCACGAGCCCTTCAGACCTCTGGCAATGGAAGATGTCAGAAGAAATGGAAGTGAACCTTTATCTGGGCAGACTTCAAGGAGCAAAAATGGTGAGTTTGTTCCGCAGGATCCCCAGTCTTATTTGCACTGGATGGTGCTCTCCCCGGCAGCTCACTATCTTTCCTTCTTTTCTCTTGCTTGTCGTCGTGCACCAGGGAGCTGGGGGCCAAAAGCCAAGCAGAGCGTGATCCATGCGCGGTCCAGGCCAGGCAGCAGGCCACGGCAGTTTTCCTTGCTGTCGGAGAGGTCTGGGCTCAGTGACCCTTCGGTGCCTCTGCATCGTGCCTGCATGTGCCCTGCTCCTGACAGGCACCCTCAGGACACACCAGCCCAGCTCAGCCCGTTGGTAGCCGGTGAAGACATTGAGAAGAATGTGCGCGTGAACGAGGACGGCAGCTTGTCCGTGGAGATGAAAGTCCGCTTCCACCTACCGGGGGAGGACCTGCTCCTGTGGTCCAGGAGGGTCGGGAGGGCCAGCAATCTCACAGCGGCCAGTGGGGAGGGCCCCGTCCTGGGGGAGGCAGATCCCCTAGGCTGTGTGTGGAGGGACCCCCCTAGGGACCCCTCAGAGCCTGGGGCACAGGGACTGGGGCCCTGCGAGGCAGGAGGTGTGGGAGCCTTTGACCGAGGCCGGTGGCAGCCGGGGTCTAGATATGAGATCTGGATGAACCCCCTTTATGCCCCCCAGGGAGAGCAGACAGCCTCTCAGAGGAGGTCTGGGCTGACCCAGAAGTCCCACTCCAGGACCCCCAGGAGCCCAGGGGTCACCAGCAGGAAAAGAAGGAACAAGGACAGTGCCAGCCCTTCCTCCAGTGACAGACCCCCTGAAGGTTCTGAGACCAACTCTTCCTGCTGTTCCAGGTCCCTGGAGGATGGTGTGGGCAGCTGTGGCCCACATCTGGCCTCGGGGGCTGGTGAGGGCACAGGCAAGGGAGCAATGCCGGGCCGCAGGGAGCACCCTGGCTGCCTGAAACCCGGGACCCGAGGCCCGGCAGACGCTTTTCCTGACTCCTCGGCAAGTGGCGGGTCTCACGAGGAGTCCAGTGAAAGGGGTGAGCTGCACCAGGGCTGCCCCAGCAAGAAGAGCAGGGCCGTGACTTCCTGGGGGGCCACCCAGGGGGGAGGCCCCGCTTCCCCCACTGTGAGCCCCTCGTCTGTAAGGAAAGAGGGCCCACAGGCAGGGGAGAGTGGACAGGGCGCCGGGTACCCCCAGGCCAGGAGTGGGTCTGGGGTGAGGCTGCCCTTGGCTCGGGGCGGCCGGGCTGGCTCTGGGGAGGATGCAGGAGGCCACTCTCCGCCGTCTGTCTGTACCTCAGCCCCAGGCGGGAGCAGAAAGCAGGAGAGCAGAGCCAGCGCCCTGTCCTTACCCAGCGTTTCTGTCCTCAGCCGAGGGTCCCAGAGGGGCCGCCCCAGGCAGCACCACACCCCAAAGGACACCCAGTGCCCACTCGGCTTGCCTGTGTCCAGGCCAGTGCCGGGACCTCCCAGCAGAGGCAGGGCCCGCCCAGACAGCCCAGCGCCTGGCCCTTCTGAAAGCCCACGCAGCCCCAGGAGCCGGGCCTCGCGGGACCCGGGGCCATCCTTCTCTGCCTCTCTTCATTCCCGGGACACGCGGGGGCTCAGCAGCACTCCCATCACCCCTGTGAGCAATTCTGACTGTGTTTCCAATTTCCAGCCCCCAAATTCCCCTGCTGCTGAGACCGAAGGGGACCCTGAGCTCAGGGCGTGTTCACCAGCTCCCACACCTTCAAACACATCTGGCTCTTTCAACTCCCAAGCTGATGGCCTGGCTGAAAAGGCAGGGGGTGACAGTCCCAAGCCTTCCTGGCCCTTGGTCCTGCCAGTCGGGTGGCCCGAGGGAGGGAGGCCGGGAGCGCACAGGGACAGCTGCTGGTCACAGCTGGGCGCATCCCCGGCCCTCGGGTCCCCCGGTGGGAAGACACAGTCGCTGCCAGCCTCCCCGTCTTGGGACGGCCAGGGGTCCTTCTCTGAGCCCTGCTTGGTGTGCAGCAGGTACTGTCCCATGCCTCGCAAGCCACGGCCCTCGGGCAAGAAGCATCCTTTGTGTACCCTCAGCCACAGCGAGGGCAAACACAGTGCTGATGGGGAGCCGGGCGGGGCTGAGGCAGGGGAGGGAAAGCTGGACGTGTGGCGCCCTCGGCCCCCTGGCTCTCCGGGAGGGCCCGTGGGGAGCGCAGTCAGAGCCGTGAGAAGGGGCGGCTCCCACCGCGGTCCCAAGCTCGGGAGAACGTTCCAGGAGAAGGTCTCGGGTGGAGGAGACGGCCTGGAGGAGCAAGAGGAAGGTGGCTGCATGACGCTGGGCACCCTGCCCCGAGCCTCCCCAGAAGCCGTGGTCCGTGCGTGGCTGAGCAACATCCCGGAGGAGCCCGTGAGATACGAGATAGTGGACGAGGGCGAAGATGTGGCTGGGCACAGCCCGGAAGGTGCCAAGGAGGACCCTGTTGACAAATATCCCCCAGATGGCCTGGAAGGGTCAGCGCAGGCCAGACAACTGCCCCTGGAAGGGGCGGCCAGTGAGAAAGCAGAACCAGATGCAGCCCTCCCAGTGACTGGCAGTGCTGGTCCCAAGTCASGAGAGGGCCTGCCTTGCAGTGGGGTTTCAGAAGCCCCTGCGGAGGCTGGTGAAGGCAAAGGAGCGGCTGTGGACTGTGCAATGGGCCAGTGCGAGCTTCCCAGCAGGGTCTCTTCCTCCGTACACATCATGAAGGCGCTGATGGGATCCAGGCCAGGCCGGCCCAGCAGTGTGCCCGAAGTGTCCAGCTCAGTGGGCAGGAGGCTCGGCCGCTCGGCCCAGGCCCTCATCACCTGTCTTGCCAGGCTCCACTTCTTTGACGATGACCTTGGGTCTCCCGCTGGCAAAGTGAGGTTCACAGACTCTCCTCGGTACCAGGAGCTCCTGAGCACCTTCCAGGCCCTGTGGCCGGGGAGTGGCCATGGGCACAGAGAGCTGGACTCGGGCCTCCAGGAGCTAGGCTGGGGCCAGGCCCTGCCGGCCCTTGGGTCCCACGCTGCAACTGAGGACTTCACGCCGACATCTTCCTCTGGTGTGGATGTCGGCAGTGGTTCCGGAGGCTCAGGCGAGGGCCACGGGCCCTGCACCGTGGACCGCGCCCTGGTCCCTGAGAGGATGGAGCTGCCCTCAAGCATCCCCTGCCAGAGGCCTGATTCCAGAACCTCAGGCAACCCAGAGGATGCGGGAAACCAACAGCCGAGTGGTTCCGAGGCTGGTGGTGCCTCCAGCGAGGACAGGGCAGAAAGAAACAGCGGGGAACAGATGTTGGGCAGTGACCTGGACCAAGGTGTTAAAAACACGATGCAAGAAGAGGGGGTACAATTAGAGGAAATAAAAGAGGAAAAAGAAAGAGCAGAACTGCAAGAAGAGGGTGTTAAAGGGTTTCCCGAAGAGGAAGGAACCACAGGACGAGAATTGTCAGGGGCGGGCTCTCAGGACGGGGCGGGCGCCAGGGAAGACAAGAGCCTGCAGGAAGAGGAGGGAGACCCCACCTCGGCCGCGCTGAGCCCTCCAGGGAAGACAGAGAGCCTGACAGAGCGCCCTAGGAGCCTCAGGGAGAGCGACCCAGACGCCAGCGGGAGTCAAAGTGGCCCCAACGCTGAGCCTTCTTTGGAGAAGTTGTCCACAGCAGCTGAGACAGGCTGTGGGCAAACCCAGGCCAAGCTCACCCAGGGGGCGGGGGAGAGGGGCACTTCCACAGCCCACAGAAGGCCTCTGGACCCTGACCCCCTCTGGGTGTCCAAGTTGCTGAAGAAGATGGAGAAGGCCTTCATGGCCCACCTCGCCACTGCCACGGCCGAGCTCCAAGCCCGCTGGGGCCTGGAGAGCAACGACCTGCTGGACCAGATGGTGGTCGAGCTGCAGCAGGACGTGGGCCGGAGGCTCCAGGACAACATCGAGAAGGAGCTCCGCAAGGTGCAGAGCCGGGCGGGGGGCACGGCGCCGGGGCCACCCAGGGAAGCCCTCCGCTGGGAGACGCCCCTGCAGACCAAGAAGTACAGGCCGCACCTCCGGGACCTGAGTGTCCTCTCAGCTTTCTCCGAGCACACGCGGGGCTGGGGGCCCCCCTCCTTCTCCCTGGAGGACGTGCCAACCTTCAGAGGAGCCCTGGGGACCCGGCCGGGGGAGGAGGCTGAGGAGGAGGAGTTCTGTCCCTGCGAGACCTGCGTGAGGAAGAAAGTGGTCCCTGCATCCCCGAGGGACGCAGTGCGGGCAGCCAGTGCGCCCGTCAGAGAGGCCTTTGACCTGCAGCAAATTCTGCAGAAGAAGAAAGGAAGATGTGCGGACGGGGAGACAGCAGAGGCGGCCCCTGCGACGAGGGGGATGGAGCCCCTTGAGAGGGCCCCCTCGGGGACGGACCCTGGGACAGAGGGAGGCCCGGCTCCAGCGCAGGGGACAGAGGGAGGCCTGGCTCCAGAGCAGGGGACAGAGGGAGGCCTGGCTCCAGAGCAGGGGGAAGAGGGAGGCTCTGACTTAGAAGCTGAGAAGGTAGTGAAAAGTCTCGCTTCCACAGAAGTGATGCTTAAAAACCTCCCCATGGACAGGACAGATGGCTTTGGCCAAGACGACTTAGATTTCTAA

Related Sequences

bmy_09203T0 Protein

Length: 1888 aa      View alignments
>bmy_09203T0
MSREKRVSGQLGWPVHRTERHVVTWAGIACSWLLQESQMRQWGSTMAGIEANSWTNGLDPAQLACSPISHAGGSRLWYSPVRCLVLHTMNSTPRDAQAPGHRECLLPSVARTPSVSQVMPAKKITFLKRGDPQFAGVRLAVDRRAFRSFGALMDELSQRVPLSFGVRSVTTPRGLHGLSTLEQLQDGGCYLCSDKKPPKTPSGPGRPRARSPSQQSRDFEGCCEAPGTASSCKSLRAPRRVTLVKNGDPRYQQAVVLSHRNTRNLTAFLSKASDLLRFPVKQVYTTGGQKHTLLIGENEKEQILYFKDGTKSPNIANYDVDSLKGLLHSPSVLVCAGHEPFRPLAMEDVRRNGSEPLSGQTSRSKNGEFVPQDPQSYLHWMVLSPAAHYLSFFSLACRRAPGSWGPKAKQSVIHARSRPGSRPRQFSLLSERSGLSDPSVPLHRACMCPAPDRHPQDTPAQLSPLVAGEDIEKNVRVNEDGSLSVEMKVRFHLPGEDLLLWSRRVGRASNLTAASGEGPVLGEADPLGCVWRDPPRDPSEPGAQGLGPCEAGGVGAFDRGRWQPGSRYEIWMNPLYAPQGEQTASQRRSGLTQKSHSRTPRSPGVTSRKRRNKDSASPSSSDRPPEGSETNSSCCSRSLEDGVGSCGPHLASGAGEGTGKGAMPGRREHPGCLKPGTRGPADAFPDSSASGGSHEESSERGELHQGCPSKKSRAVTSWGATQGGGPASPTVSPSSVRKEGPQAGESGQGAGYPQARSGSGVRLPLARGGRAGSGEDAGGHSPPSVCTSAPGGSRKQESRASALSLPSVSVLSRGSQRGRPRQHHTPKDTQCPLGLPVSRPVPGPPSRGRARPDSPAPGPSESPRSPRSRASRDPGPSFSASLHSRDTRGLSSTPITPVSNSDCVSNFQPPNSPAAETEGDPELRACSPAPTPSNTSGSFNSQADGLAEKAGGDSPKPSWPLVLPVGWPEGGRPGAHRDSCWSQLGASPALGSPGGKTQSLPASPSWDGQGSFSEPCLVCSRYCPMPRKPRPSGKKHPLCTLSHSEGKHSADGEPGGAEAGEGKLDVWRPRPPGSPGGPVGSAVRAVRRGGSHRGPKLGRTFQEKVSGGGDGLEEQEEGGCMTLGTLPRASPEAVVRAWLSNIPEEPVRYEIVDEGEDVAGHSPEGAKEDPVDKYPPDGLEGSAQARQLPLEGAASEKAEPDAALPVTGSAGPKSXEGLPCSGVSEAPAEAGEGKGAAVDCAMGQCELPSRVSSSVHIMKALMGSRPGRPSSVPEVSSSVGRRLGRSAQALITCLARLHFFDDDLGSPAGKVRFTDSPRYQELLSTFQALWPGSGHGHRELDSGLQELGWGQALPALGSHAATEDFTPTSSSGVDVGSGSGGSGEGHGPCTVDRALVPERMELPSSIPCQRPDSRTSGNPEDAGNQQPSGSEAGGASSEDRAERNSGEQMLGSDLDQGVKNTMQEEGVQLEEIKEEKERAELQEEGVKGFPEEEGTTGRELSGAGSQDGAGAREDKSLQEEEGDPTSAALSPPGKTESLTERPRSLRESDPDASGSQSGPNAEPSLEKLSTAAETGCGQTQAKLTQGAGERGTSTAHRRPLDPDPLWVSKLLKKMEKAFMAHLATATAELQARWGLESNDLLDQMVVELQQDVGRRLQDNIEKELRKVQSRAGGTAPGPPREALRWETPLQTKKYRPHLRDLSVLSAFSEHTRGWGPPSFSLEDVPTFRGALGTRPGEEAEEEEFCPCETCVRKKVVPASPRDAVRAASAPVREAFDLQQILQKKKGRCADGETAEAAPATRGMEPLERAPSGTDPGTEGGPAPAQGTEGGLAPEQGTEGGLAPEQGEEGGSDLEAEKVVKSLASTEVMLKNLPMDRTDGFGQDDLDF*