Part of scaffold_442 (Scaffold)

For more information consult the page for scaffold_442 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

INTU ENSTTRG00000012971 (Bottlenosed dolphin)

Gene Details

inturned planar cell polarity protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012308, Bottlenosed dolphin)

Protein Percentage 95.25%
cDNA percentage 96.54%
Ka/Ks Ratio 0.45839 (Ka = 0.0266, Ks = 0.0581)

INTU ENSBTAG00000012824 (Cow)

Gene Details

Protein inturned

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017038, Cow)

Protein Percentage 90.41%
cDNA percentage 91.34%
Ka/Ks Ratio 0.26266 (Ka = 0.0546, Ks = 0.2078)

INTU  (Minke Whale)

Gene Details

inturned planar cell polarity protein

External Links

Gene match (Identifier: BACU004189, Minke Whale)

Protein Percentage 95.69%
cDNA percentage 96.69%
Ka/Ks Ratio 0.38451 (Ka = 0.0241, Ks = 0.0628)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2793 bp    Location:91372..164489   Strand:+
>bmy_09259
ATGATGGCGTCTCCGGCGTTGTGCGGTTCACGTCAGAGCCCAGAGGGACTCCCTGGAGACCCTTCCTCACAAGAAGAAGATGCGGATTGTGATCCTGAAGATCCGGTCAGCGACTCGGGTTCATACTCCTCTACGAGTACCGATTATGATGACCTTGAGCCTGAATGGCTGGACAGTGTGCAGAAGAATGGAGAGCTATTTTATTTGGAGTTGAGTGAGGATGAAGAAGAAAGCCTCCTTCCTGAGACACCTACTGTGAACCATGTCAGGTTCAGCGAAAACGAGATTATTATTGAAGAGGATGATTACAAAGAAGGAAAAAAGTATGAACCCAAACTCAAGCAGTTTACCAAGATTTTAAAAAGTAAAAAACTTTTACCCAAGCGCTATAATAAAAAAAATAGCAATGCCAGTGGGCCAGTATCCATTCTAAAGCATCAGTCCAATCAGAAAACAGGAGTTGTTGTCCAACAGCGGTACAAAGACGTGAACGTTTACGTGAACCCCAAAAAGCTAACCRTCACCAAAGCCAAAGAGCAGCTCAAGCTTCTGGAAGTACTGATTGGGATTATCCATCAGACCAAGTGGAGCTGGAGAAGAAGTGGAAAACAGGGCRGTGGAGAGAAGCTTGTGGTCCATGGCCTGCTGCCAGGAGGGTCTGCTATGAAGAGTGGTCAGATATTAATTGATCAGAAATCCTATTCCAAGTTGGGTATGTGTTCATACCCATTTGCAAGAATGGACGATTTTAATGTCACGGTGAAACTGACGTTCGAAAATGCACATGCTGTGAAAAAGCAAACAACTCAACCAAGACAGAAAAAGGCACAGTCAAACACAAGTGATTTAATCAAACTTCCATGGGGAGAAGAGGTCAAAGGTACCCAGCAGAATATTCTAAACACTCCTCACATCGTTATGTATCTCACACTACAGCTCGACTCGGAAACATCAAAGGAAGAGCAGGAAATCCTATATCATTATCCAGTATCTGATGCATCTCAGAAACTTAAAAGCGTGAGAGGGATATTTCTCACACTCTGTGACATGCTGGAAAATGTAACTGGGACRCAAGTTACTAGCTCATCCCTTCTTTTAAATGGGAAACAAATTCATGTAGCTTATTGGAAAGAATCTGACAAGCTGTTGTTAATTGGCCTGCCTGCTGAGGAAGTTCCTCTTCCTCAGCTAAGGAATATGATTGAAGATGTTGCCCAAACCTTAAAATTTATGTATGGTTCTTTAGATAGTGCCTTTTGCCAGGTTGAGAATGTTCCTCGTTTRGATCATTTTTTCAGCTTGTTMTTTCAAAGAGCACTTCAGCCTGCTAAACTACATTCCAGTGCCTGTCCCAGTACACAACAATATGATGTTTCCAGTGCAGTACTTTTAGACAATCTCCCTGGAGTTCGGTGGCTCACACTTCCACAGGAAATTAAGGCGGAATTAGACACAGCATTGAGTGACTTGGAGGCTGCAGATTTTGCAGAACTGTCTGAGGATTACTATGACATGAGACGGCTATATACAATTTTGGGCTCTTCTCTATTTTACAAGGGTTATTTGATATGCAGTCATTTGCCTAAGGATGATCTTATTGATATTGCTGTATACTGTCGCCACTATTGCCTACTGCCTTTAGCAGCAAAACAAAGAATTGGTCAGTTGGTAATATGGAGAGAAGTATTTCCTCGACATCACCTCCAACCTTCTACAGACTCAAACACTGAAGTCTTTCAGGAATCTGAAGGGAGGTATTTTTTGCTAATTGTTGGCTTGAGACATTATATGTTGTGTGTGCTATTAGAAGCTGGAGGCTGTGCATCCAAAGCTGTTGGGAATCCTGGACCAGACTGTATATATGTGGATCAGGTCAAAACAACTCTTCACCAGCTGGAGGGGGTAGATTCCCGCATAAATGAACGGCTAGCCTCTTCTGCAACCCCCTGTTTGTCTTGTGCTGACTGGTTTCTTGCTGGATCACATGAAAAATTAGATAATTTAACAACCTCCCCTATCCTCAGTAGGCTACAAGGTACTTCCAAAGTAGCAACCTCTCCAACATGCAGAAGAACTCTTTTTGGTGACTATTCCCTAAAGACACGTAAGCCCAGTCCATCCAGAAGTGGAGGATCTGACAGTGGTTGTGAAGGTGGAGAAGGTGTTGGCCTGAGTCCCCACACTGCAGCATCTCAGGGTTCTGATGGTTCAGAGGAAAGCGGGGCCTTGCTTAAGGTCACTAAAAAGAAGTCTACTCTTCCAAATCCATTTCATTTGGGGAACCTGAAAAAGGACCTTTCAGAAAAAGAACTGGATATATATAACACAATGAAATTGACGTCTGGTCCTGAGAACACACTTTTCCACTATGTCGCCTTAGAAACAGTGCAAGGGATCTTTATTGCTCCTACCCACGAAGAGGTGGGACAACTAAGTGGCTCTATCCACCCTCAGCTGATAAAAAATTTCCATCAGTGTTGTCTCTCCATTCGTGCAGTTTTCCAACAGACATTGGTTGAAGAGAAGAAGAAAGCACTAAATGGTGGAGATCATTCAGGTTCTACAAATTCGGTGTCTTCTCTTAACCCTGTGAAAGAACATGGTGTATTGTTTGAATGCTCACCTGAAAACTGGACTGATCAGAGAAAAACACCACCAGTTATGGCTTACTGGGTAGTAGGGAGGCTCTTTCTTCATCCCAGACTTCAAGAACTTTACGTCTGTTTTCATGACTCAGTCACAGAAATTGCCATTGAAATGGCTTTTAAATTGTTCTTTGGATTAACCTTGTAG

Related Sequences

bmy_09259T0 Protein

Length: 931 aa      View alignments
>bmy_09259T0
MMASPALCGSRQSPEGLPGDPSSQEEDADCDPEDPVSDSGSYSSTSTDYDDLEPEWLDSVQKNGELFYLELSEDEEESLLPETPTVNHVRFSENEIIIEEDDYKEGKKYEPKLKQFTKILKSKKLLPKRYNKKNSNASGPVSILKHQSNQKTGVVVQQRYKDVNVYVNPKKLTXTKAKEQLKLLEVLIGIIHQTKWSWRRSGKQGXGEKLVVHGLLPGGSAMKSGQILIDQKSYSKLGMCSYPFARMDDFNVTVKLTFENAHAVKKQTTQPRQKKAQSNTSDLIKLPWGEEVKGTQQNILNTPHIVMYLTLQLDSETSKEEQEILYHYPVSDASQKLKSVRGIFLTLCDMLENVTGTQVTSSSLLLNGKQIHVAYWKESDKLLLIGLPAEEVPLPQLRNMIEDVAQTLKFMYGSLDSAFCQVENVPRLDHFFSLXFQRALQPAKLHSSACPSTQQYDVSSAVLLDNLPGVRWLTLPQEIKAELDTALSDLEAADFAELSEDYYDMRRLYTILGSSLFYKGYLICSHLPKDDLIDIAVYCRHYCLLPLAAKQRIGQLVIWREVFPRHHLQPSTDSNTEVFQESEGRYFLLIVGLRHYMLCVLLEAGGCASKAVGNPGPDCIYVDQVKTTLHQLEGVDSRINERLASSATPCLSCADWFLAGSHEKLDNLTTSPILSRLQGTSKVATSPTCRRTLFGDYSLKTRKPSPSRSGGSDSGCEGGEGVGLSPHTAASQGSDGSEESGALLKVTKKKSTLPNPFHLGNLKKDLSEKELDIYNTMKLTSGPENTLFHYVALETVQGIFIAPTHEEVGQLSGSIHPQLIKNFHQCCLSIRAVFQQTLVEEKKKALNGGDHSGSTNSVSSLNPVKEHGVLFECSPENWTDQRKTPPVMAYWVVGRLFLHPRLQELYVCFHDSVTEIAIEMAFKLFFGLTL*