Part of scaffold_442 (Scaffold)

For more information consult the page for scaffold_442 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PHF17 ENSTTRG00000008170 (Bottlenosed dolphin)

Gene Details

PHD finger protein 17

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007733, Bottlenosed dolphin)

Protein Percentage 96.61%
cDNA percentage 96.86%
Ka/Ks Ratio 0.16404 (Ka = 0.0146, Ks = 0.0887)

BT.95514 ENSBTAG00000017493 (Cow)

Gene Details

protein Jade-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032057, Cow)

Protein Percentage 93.69%
cDNA percentage 91.63%
Ka/Ks Ratio 0.0774 (Ka = 0.0273, Ks = 0.3534)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2046 bp    Location:1092250..1119929   Strand:+
>bmy_09275
ATGCCTGAGTTAGACGAATACACCATGGAAAGGGTCCTGGAGGAATTTGAACAGCGATGCTACGATAATATGAATCATGCTATAGAGACTGAAGAAGGCCTGGGGATTGAATATGACGAAGACGTTGTCTGTGACGTCTGCCAGTCGCCTGACGGTGAGGACGGCAATGAGATGGTGTTCTGTGACAAATGCAACATCTGTGTGCACCAGGCCTGTTACGGAATTCTCAAGGTCCCAGAGGGCAGTTGGCTGTGCCGGACGTGTGCCCTGGGGGTTCAGCCCAAGTGTTTGTTGTGTCCCAAGAAAGGCGGAGCGATGAAGCCTACCCGCAGTGGGACCAAGTGGGTCCACGTCAGCTGTGCGCTGTGGATCCCCGAGGTGAGCATTGGCAGCCCCGAGAAGATGGAACCCATCACGAAGGTGTCTCACATCCCCAGCAGTCGGTGGGCGCTGGTGTGCAGCCTCTGCAACGAGAAGTTTGGGGCCTCCATACAGTGCTCTGTGAAGAACTGCCGCACAGCCTTCCACGTGACCTGTGCTTTCGACCGGGGCCTGGAGATGAAGACCATCTTGGCTGAGAACGACGAAGTCAAGTTCAAGTCCTACTGCCCGAAGCACAGCTCACATGGCAAGCCCGAGGAGAGCCTCGGTGAGGGGGCCGCTCAGGAGAATGGGGCCCCTGAGTGCTCCCCCCGGGACCCGCTGGAGCCCTTTGGCAGCCTCGGGCAGAATCCAGAGGAGGCCCGCCGGGTGAGCGTCCGGAAGCAAAAGCTGCAGCAGCTGGAGGATGAGTTCTACACCTTCGTCGACCTGCTGGATGTTGCCAGGGCCCTGCGGCTGCCCGAGGAGCTGGTGGACTTCCTGTACCAGTACTGGAAGTTGAAGAGGAAGGGCAACTTCAACAAGCCCCTGATCACCCCAAAGAAAGACGAAGAGGACAATCTCGCGAAGCGGGAGCAGGATGTCTTGTTTAGGAGGCTGCAGCTGTTCACTCACCTGCGGCAGGACCTGGAGAGGGTTCGGAACCTCACTTACATGGTGACCCGCAGGGAAAAGATTAAACGATCTGTGTGCAAAGTCCAGGAACAGATATTCAATCTTTACACTAAGCTTTTGGAGCAAGAAAGAGTTTCAGGTGTGCCTTCTTCTTCCTGCTCCTCCTCCTCACTGGAAAACATGCTTTTGTTTAACAGTCCTTCTGTGGGCCCCGATGCTCCCAAGATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAGGAAGCAAATGGGTACTTCCTTGGTTCACTCGATGAAAAAGCCCCATAAGCGAGATCCATTGCAGAATAGTGCTGGGAGTGAAGGCAAAACCCTGCTAAAGCAGCCAGACCTGTGCAGTAGAAGGGAGGGGATGGTGGTCCCAGAGAGCTTTTTGAGTTTTGAAAAGACCTTTGCAGAAGCACGTCTCATATCAGCACAACAGAAAAATGGTGTGGTGATGCCAGACCACGGGAACAGAAGAGACCACCGTTTTCATTGTGATCTTGGTAAGGGAGACTTGAAGGACAGACCTTTCAAACAGAGTCACAAGCCTCTCAGGTCCACAGACGTGTCCCAGAGGCATGTGGACAACACAAGAGCTGCCACCTCCCCTGGAGTGGGGCAGTCAGCACCCGGCACGAGGAAGGAGATGGTGCCCARGTGCAACGGCTCCCTAATCAAAGTAAACTATAACCAGACTGCAGTCAAAGTGCCTACAACACCTGCTAGCCCAGTGAAAAACTGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCGCGAGGGGCCCTGCCGCCAGCACTCAGACTACCCCTATTTGGGCTTAGGCCGAGTTCCAGCCAAGGAGAGGGCAAAAAGCAAATTGCAATCTGACCATGAGAATGACGGGTACGTCCCTGATGTAGAAATGAGTGACTCAGAGAGTGAGGCATCGGAAAAGAAATGTATGCATGCCAGCAGCACTATCAACAGGAGGACAGACATCATCAGGAGAAGCATTTTGGCCTCTTGA

Related Sequences

bmy_09275T0 Protein

Length: 682 aa      View alignments
>bmy_09275T0
MPELDEYTMERVLEEFEQRCYDNMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHGKPEESLGEGAAQENGAPECSPRDPLEPFGSLGQNPEEARRVSVRKQKLQQLEDEFYTFVDLLDVARALRLPEELVDFLYQYWKLKRKGNFNKPLITPKKDEEDNLAKREQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNLYTKLLEQERVSGVPSSSCSSSSLENMLLFNSPSVGPDAPKIEDLKWHSAFFRKQMGTSLVHSMKKPHKRDPLQNSAGSEGKTLLKQPDLCSRREGMVVPESFLSFEKTFAEARLISAQQKNGVVMPDHGNRRDHRFHCDLGKGDLKDRPFKQSHKPLRSTDVSQRHVDNTRAATSPGVGQSAPGTRKEMVPXCNGSLIKVNYNQTAVKVPTTPASPVKNWGGFRIPKKGERQQQGEAREGPCRQHSDYPYLGLGRVPAKERAKSKLQSDHENDGYVPDVEMSDSESEASEKKCMHASSTINRRTDIIRRSILAS*