Sequence detailsbmy_09283 (Coding sequence)

Part of scaffold_439 (SequenceType object (1))

For more information consult the page for scaffold_439 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TGIF2ENSTTRG00000006135 (Bottlenosed dolphin)

Gene Details

TGFB-induced factor homeobox 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005796, Bottlenosed dolphin)

Protein Percentage 97.44%
cDNA percentage 98.01%
Ka/Ks Ratio 0.21883 (Ka = 0.0113, Ks = 0.0519)

BT.64617ENSBTAG00000005286 (Cow)

Gene Details

homeobox protein TGIF2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006955, Cow)

Protein Percentage 94.3%
cDNA percentage 93.25%
Ka/Ks Ratio 0.10176 (Ka = 0.0257, Ks = 0.2527)

Additional orthologs identified in other species via the OPTIC pipeline.

TGIF2 (Human)   Tgif2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 477 bp    Location:232850..233326   Strand:+
Raw sequence 
>bmy_09283
ATGCTTCGGAAGGACGGCAAAGACCCCAACCAGTACACCATTTCCCGCCGTGGGGGCAAGGCCTCCGATGTGGCCCTCCCCCGAGGCGGCAGCCCCTCAGTGCTGGCTGTGTCTGTGCCGGCCCCCACCAATGTGCTCTCCTTGTCCGTGTGCTCCATGCCGCTCCACTCAGGCCAGGGAGACAAGCCGGCAGCCACCTTCCCCCAAGGCGAGCTGGAGCCCCCCAAGCCCCTGGTGACCCCTGGTAGCACACTCACCCTGCTGACCAGGGCTGAAGCTGGAAGCCCCACGGGTGGACTCTTCAACACACCACCGCCCACACCGCCGGAGCAGGACAAGGAGGACTTCAGCAGCTTCCAGCTGCTGGTGGAGGTGGCGCTCCAGAGGGCAGCTGAGATGGAGCTCCAGAAGCAGCAGGACCCGTCACCCCCATTGCTGCGCACTCCCATTTCTTTCGTCTCTGAAAACCCCAAGTAG

Related Sequences

bmy_09283T0 SequenceType object (3)

Length: 159 aa      View alignments
>bmy_09283T0
MLRKDGKDPNQYTISRRGGKASDVALPRGGSPSVLAVSVPAPTNVLSLSVCSMPLHSGQGDKPAATFPQGELEPPKPLVTPGSTLTLLTRAEAGSPTGGLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQKQQDPSPPLLRTPISFVSENPK*