Part of scaffold_439 (Scaffold)

For more information consult the page for scaffold_439 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBL1 ENSTTRG00000001933 (Bottlenosed dolphin)

Gene Details

retinoblastoma-like 1 (p107)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001816, Bottlenosed dolphin)

Protein Percentage 98.97%
cDNA percentage 98.89%
Ka/Ks Ratio 0.1373 (Ka = 0.0041, Ks = 0.0301)

RBL1 ENSBTAG00000011541 (Cow)

Gene Details

retinoblastoma-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015333, Cow)

Protein Percentage 97.31%
cDNA percentage 96.03%
Ka/Ks Ratio 0.09597 (Ka = 0.012, Ks = 0.1251)

RBL1  (Minke Whale)

Gene Details

retinoblastoma-like 1

External Links

Gene match (Identifier: BACU015515, Minke Whale)

Protein Percentage 99.36%
cDNA percentage 99.02%
Ka/Ks Ratio 0.07811 (Ka = 0.0024, Ks = 0.0301)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2508 bp    Location:630986..557084   Strand:-
>bmy_09296
GACCTTTTTGAGGAGAAACGCGGATGCAGACCATCGAAGAGACGTCGCGCTGCGGCTCCTGATTTTCGCGCGCTTTTGGCGCGGGTGGTTGTGGGTAGCGCGCCCAGGAGGGAGAAAGGAGCTGGGGGGTCTGTGACCGCGCCGCCCGCCGCGCCTGAGGGGATGGATGAGGACGATCCTCACGCTGAGGGGGCGGCGGTGGTCGCCGCGGCCGGGGAGGCGCTGCAGGCCCTGTGTCAGGAGCTGAACCTGGATGAGGGGAGCGCGGCCGAAGCCCTGGACGACTTCACCGCCATCCGGGGCAACTACAGCCTAGAGTTTTTTAGTAAAATGAAGAAGTGGATGGACATGTCAAACTTGCCACAAGAATTTCGTGAACGTATAGAAAGGCTAGAAAGAAATTTTGAGGTGTCTACTGTAATTTTCAAAAAATTTGAGCCAATTTTTTTAGATATATTTCAAAATCCATATGAAGAGCCACCAAAGTTACCACGAAGCAGGAAGCAGAGGAGGATTCCTTGCAGTGTTAAGGAGCTCTTTAATTTCTGTTGGACCCTCTTTGTTTATACTAAGGGTAATTTTCGTATGATTGGAGATGATTTAGTAAACTCTTATCATTTACTTCTGTGCTGCTTGGATCTGATTTTTGCCAATGCCATTATGTGCCCAAATAGACGAGACTTGCTAAATCCGTCATTTAAAGGTTTACCATCTGATTTCCATACTGCTGACTTTAGGGCTTCTGAAGAGCCTCCCTGCATCATTCCTGTACTGTGTGAACTACATGACGGACTTCTGGTAGAAGCCAAAGGAATAAAGGAGCACTACTTTAAACCATATATTTCAAAGCTCTTTGACAGGAAGATTTTAAAGGGAGAATGCCTTCTGGACCTTTCTAGTTTTACTGATAATAGCAAAGCAGTGAACAAGGAGTATGAAGAATATGTTTTAACTGTTGGTGACTTTGATGAGAGAATCTTTTTGGGAGCAGATGCAGAAGAGGAAATTGGAACTCCTCGGAAGTTCACTGGTGATGCCCCATTAGGGAAACTGACAGCACAGGCTAATGTGGAGTGTAACCTTCAACAACACTTTGAAAAAAAAACATCATTTGCACCTTCTACACCACTGACAGGACGACGATATTTAAGAGAAAAAGAAGCAGTCATTACTCCTGTTGCTTCAGCCACCCAAAGTGTGAGCCGGTTACAGAGTATTGTGGCCGGACTGAAAAATGCACCAAGTGAACAACTTGTAAACATTTTTGAGTCTTGTATGCGTAATCCTATGGAAAACATTATGAAAACAGTGAAAGTAATAGGAGAGACTTTCTGCCAACACTATACCCAATCAACAGATGAACAGCCAGGATCTCACATAGATTTTGCTGTAAACAGGCTAAAGCTTGCAGAAATTTTGTATTATAAAATATTAGAGACTGTAATGGTTCAGGAGACACGAAGACTTCATGGAATGGACATGTCAGTTCTTTTAGAGCAGGATATATTTCATCATTCCTTGATGGCCTGTTGTTTGGAAATTGTGCTCTTTGCCTATAGCTCACCTCGTACTTTTCCCTGGATTATTCAAGTTCTTAATCTGCGACCATTTTATTTTTATAAGGTTATATTCCCAAATAATTTTGAAACAGGAAATGGGGGAAATGTACAGGGACATCTTCCCATGATGCCAGTGTCTCCTCTGATGCATCCAAGGGTCAAAGAAGTTCGGACTGACAGTGGGRGTCTTCGAAAGGATACGCAACCATTGTCTCCAATTTCTGTCCATGAACGCTACAGTTCTCCTACCGCTGGGAGTGCTAAGAGAAGACTTTTTGGGGAAGACCCCCCAAAGGAAATGCTTATGGACAGGATCATAACAGAAGGAACAAAATTGAAAATTGCTCCTTCTTCAAGCATTACTGCTGAAAATATATCAATTTCACCTGGGCAAAGTCTTCTAACAATGGCCACAGCCATAGTAACAGGGACAACAGGACATAAAGTTACAATCCCATTGCATGGTATTGCAAATGATGCTGGAGAGATCACACTGATACCAATTTCCATGAATACAACTCAGGAGTCCAAAGTCAAGAGTCCTGTATCACTTACGGCTCAGTCATTAATTGGTGCTTCTCCAAAACAGACCCATTTGACTAAAGCACAAGAGATGGAAGCTCCACCACTCTCTCCTTTTCCACATATTAAGCAACAGCCAGGCTCCCCACGCCGCATTTCCCAGCAGCACTCCATTTATGTGTCCCCACACAAGAATGGGTCAGGCCTTACACCAAGGAGTGCTCTGCTCTATAGGTTCAACGGCAGCCCTTCTAAGAGTTTGAAAGATATCAACAACATGATAAGGCAAGGTGAGCAGAGAACCAAGAAGCGAGCAATAGCCATCGACGGTGATGCAGAATCACCTGCCAAACGCCTCTGTCAAGAAAATGATGACGTTTTACTTAAACGACTGCAGGATGTTGTCAGTGAAAGAGCAAATCATTAG

Related Sequences

bmy_09296T0 Protein

Length: 836 aa      View alignments
>bmy_09296T0
DLFEEKRGCRPSKRRRAAAPDFRALLARVVVGSAPRREKGAGGSVTAPPAAPEGMDEDDPHAEGAAVVAAAGEALQALCQELNLDEGSAAEALDDFTAIRGNYSLEFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKELFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHTADFRASEEPPCIIPVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGDAPLGKLTAQANVECNLQQHFEKKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLVNIFESCMRNPMENIMKTVKVIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSSPRTFPWIIQVLNLRPFYFYKVIFPNNFETGNGGNVQGHLPMMPVSPLMHPRVKEVRTDSGXLRKDTQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEMLMDRIITEGTKLKIAPSSSITAENISISPGQSLLTMATAIVTGTTGHKVTIPLHGIANDAGEITLIPISMNTTQESKVKSPVSLTAQSLIGASPKQTHLTKAQEMEAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYRFNGSPSKSLKDINNMIRQGEQRTKKRAIAIDGDAESPAKRLCQENDDVLLKRLQDVVSERANH*