Part of scaffold_440 (Scaffold)

For more information consult the page for scaffold_440 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POLA1 ENSTTRG00000005283 (Bottlenosed dolphin)

Gene Details

polymerase (DNA directed), alpha 1, catalytic subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004988, Bottlenosed dolphin)

Protein Percentage 94.93%
cDNA percentage 95.73%
Ka/Ks Ratio 0.37568 (Ka = 0.0207, Ks = 0.055)

POLA1 ENSBTAG00000008170 (Cow)

Gene Details

DNA polymerase alpha catalytic subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010742, Cow)

Protein Percentage 90.67%
cDNA percentage 92.58%
Ka/Ks Ratio 0.27874 (Ka = 0.0487, Ks = 0.1746)

POLA1  (Minke Whale)

Gene Details

polymerase (DNA directed), alpha 1, catalytic subunit

External Links

Gene match (Identifier: BACU009134, Minke Whale)

Protein Percentage 96.32%
cDNA percentage 96.91%
Ka/Ks Ratio 0.38665 (Ka = 0.0237, Ks = 0.0613)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2730 bp    Location:47919..133033   Strand:+
>bmy_09312
ATGCATCTGCGGGCCTCGCGCACCTACCTCTCTCTGGGCTCCTATTTCCACCGCCACGACGCGGCTCTGGAGGGCCTGGGCCACTTTCTCCGCGAAGTGCCCGAGGGGAAGCAAACGCAAGGAGCCTTTCTTGTCATCTGGACAAGTAATTTTGATCCAGTCAACTTCTTTTCATATTACTCCCTGGAAAATGTAGATGGCCTGGTTTTCCCTCATCTTGATTCTTATCCTTCATGGATCATCCCCTCAAAGAGGCTGGGATTGGACATCAGAGGGGTCATCACGGGGCGCCAAACGCGCGCCCGCGGGAAGGCCGGGGGCGGGGCGCCGCGCGGCGCGGCGCGTCACGTCAGTGGCCTTCCGGGCGGAAGTCCGCAGCCTCTGGAGCTGCTGATTGGCTTTCTGGGTGGCGCCTGTGTCGGCCTCCGCGCCAGTTTCGGGCTGGTTGGCGCGGAATCGGAAGACTCCGGGACCATGGCGCCCGTGCACGGCGATGACTGCGAGCTGGGGGCGAGCGCTGTGTCAGATTCAGGGAGTTTTGTAGGTTCTCGATCCCGGAGAGAGAAGAAATCAAAGAAAGGACGACAGGAAGCTCTGGAAAGACTGAAAAGGGCTAAAGCTGGTGAGAAGTATAAATATGAAGTAGAGGACTTCACAAGTGTTTATGAAGAAGTTGATGAGGAACAGTACTCGAAGCTGGTCCAGGCCCGCCAGGATGACGACTGGATCGTGGATGATGATGGTATTGGCTATGTGGAGGATGGCCGAGAGATTTTTGATGATGACCTTGAAGATCATGCCCTTGATTCCCATGAGAAAGGAAAAAATGATAAAGCATGCAACAAAGACAAGAGGAATGTCAAGAAGGCCGTGGTGACAAAACCGAACAATATCAAGTCAATGTTCATTGCCAGTGCTGGGAGGAAAACCGCAGATAAAGCTGTTGACTTGTCCAAGGATGATCTGCTAGGTGATATTCTACAGGATTTGAACACTGAGACACCTCAAATAACTCCACCACCTGTAATAATACCGAAGAAGAAAGGATCCAGTGGAGCTTCAATGAATCCTTTCTCTGTACACACCCCCAAGGCAGCTCCTTCAGGAAAAACCGCTTCCCCGGTCTCAAGGAAGGAGCCTTCATTAACCCCTGCTCCTCTTAAATGTGCTGGATTTGCTGGAGAGCCGGTGCCGGCATTGTGTACAGTTGACAAGGAGGAGTCAGGGGCAATGGATTTTGAAGATGGCGACTTTGATGAGCCCATGGAAACGGAGGAGGTGGACGCGGAGCCTGTGGGTGCCAAGACCTCTGACCAAGAGAGGGAGCCAGCAGAGGGGACAAAACATGAGGCAGATCCTGGGAAAGGGACCATACCCTACTCAGCAAGTTTTCTCCCAGATGTCTCTTGTTGGGACATTGATCAGGAAGATGACAGCAGTTTCTCGGCCCTGGAAGTTCAAGTGGATTCCAGTCACCTTCCACTGGTGAAAGGGGCAGATGAGGAACAAGTATTTCAGTTTTATTGGCTGGATGCTTATGAAGATCCGTACAGCCAACCAGGTGTGGTATTTCTGTTTGGCAAAGTTTGGATCGAATTCGCCCAAACCCATGTGAGCTGTTGTGTCATGGTGAAAAACATTGAGCGAACGCTCTACTTCCTTCCCCGTGAAACGCAGAAAATTGATCTAAATACAGGGAAAGAAAGTGGAACTCCAGTTACAATGAAGGATGTTTATGATGAATTTGACGAGAAAATAGCAGCAAAATATAAGATTATGAAATTCAAGTCCAAGGCAGTGGAAAAGAGCTATGCTTTTGAGATACCTGATGTTCCAGAGAAATCTGAGTACTTGGAAGTTAGATACTCGGCTGAAATGCCCCAGCTTCCTCAGGATTTGAAAGGAGAAACTTTTTCTCATGTATTTGGGACCAACACATCCAGCTTGGAACTGTTCTTGATGAACAGAAAGATCAAAGGACCTTGTTGGCTCGAAGTAAAAAATCCACAGCTCTTGAATCAGCCAATCAGTTGGTGTAAAGTTGAGGCAATGGCCTTGAAACCGGGCTTGGTGAACGTAATTAAGGATGTTGGTCCTCCTCCACTTGTGGTCATGTCTTTGAGCATGAAGACAATGCAGAATGCAAAGACACATGAAAATGAGATTATTGCTGTGGCAGCGTTGGTGCATCACAGCTTCGCACTAGATAAAGCACCCCCACGGCCTCCCTTTCACTCACACTTCTGTGTTGTGTCTAAACCAAAGGATTGTATTTTTCCATATGATTTTAAAGAAGGCATTAAGGAAAAGAATGTGAAGGTTGAGGTTGCTGCAACAGAGAGAACACTGCTAGGTTTTTTCCTTGCAAAAATTCACAAAATTGATCCTGATATCATTGTGGGTCATAATATTTATGGGTTTGAACTGGAAGTGCTACTGCAGAGAATTAACGTGTGCAAAGTTCCTTACTGGTCCAAGATAGGTCGGCTGAAGCGATCCAACATGCCAAAGCTTGGGGGCAGGAGTGGATTTGGTGAAAGAAATGCTACCTGTGGCCGAATGATCTGTGATGTGGAAATTTCAGCAAAGGAATTGATTCGTTGTAAAAGCTACCATTTGTCTGAACTTGTTCAACAGATTCTGAAAACTGAAAGGGTTGTAATCCCAATGGAAAATGTACGAAATATGTACAGGTATGATCCTGCATGCTTCAGAATTTGTCTGTCTTGA

Related Sequences

bmy_09312T0 Protein

Length: 910 aa      View alignments
>bmy_09312T0
MHLRASRTYLSLGSYFHRHDAALEGLGHFLREVPEGKQTQGAFLVIWTSNFDPVNFFSYYSLENVDGLVFPHLDSYPSWIIPSKRLGLDIRGVITGRQTRARGKAGGGAPRGAARHVSGLPGGSPQPLELLIGFLGGACVGLRASFGLVGAESEDSGTMAPVHGDDCELGASAVSDSGSFVGSRSRREKKSKKGRQEALERLKRAKAGEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDHALDSHEKGKNDKACNKDKRNVKKAVVTKPNNIKSMFIASAGRKTADKAVDLSKDDLLGDILQDLNTETPQITPPPVIIPKKKGSSGASMNPFSVHTPKAAPSGKTASPVSRKEPSLTPAPLKCAGFAGEPVPALCTVDKEESGAMDFEDGDFDEPMETEEVDAEPVGAKTSDQEREPAEGTKHEADPGKGTIPYSASFLPDVSCWDIDQEDDSSFSALEVQVDSSHLPLVKGADEEQVFQFYWLDAYEDPYSQPGVVFLFGKVWIEFAQTHVSCCVMVKNIERTLYFLPRETQKIDLNTGKESGTPVTMKDVYDEFDEKIAAKYKIMKFKSKAVEKSYAFEIPDVPEKSEYLEVRYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKVEAMALKPGLVNVIKDVGPPPLVVMSLSMKTMQNAKTHENEIIAVAALVHHSFALDKAPPRPPFHSHFCVVSKPKDCIFPYDFKEGIKEKNVKVEVAATERTLLGFFLAKIHKIDPDIIVGHNIYGFELEVLLQRINVCKVPYWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILKTERVVIPMENVRNMYRYDPACFRICLS*