Sequence detailsbmy_09336 (Coding sequence)

Part of scaffold_445 (SequenceType object (1))

For more information consult the page for scaffold_445 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRD1ENSBTAG00000001571 (Cow)

Gene Details

leucine-rich repeat and death domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000033782, Cow)

Protein Percentage 87.94%
cDNA percentage 93.04%
Ka/Ks Ratio 0.49988 (Ka = 0.0599, Ks = 0.1199)

LRRD1 (Minke Whale)

Gene Details

leucine-rich repeats and death domain containing 1

External Links

Gene match (Identifier: BACU016862, Minke Whale)

Protein Percentage 98.88%
cDNA percentage 99.03%
Ka/Ks Ratio 0.24416 (Ka = 0.0052, Ks = 0.0213)

Additional orthologs identified in other species via the OPTIC pipeline.

LRRD1 (Human)   Lrrd1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2610 bp    Location:339373..323292   Strand:-
Raw sequence 
>bmy_09336
ATGTCTGAAAAGAAGGGTACTTCAGAAGAGCTAGAGGATCTCACTAGTCAATTTAGGAAAGAATCTAGATCACGGTTAGTGGAGGAATCTGGAGTTATTAAAGAAACATCAAACTCTCTAAAGGAAGCTTCTGATGGGACCACTTCCAACCAAATTTGTAAAGCGCGTCCTAGAAAAAATACATTAGGTATATGTGATGATACATCAACATCCTCCTCTGGAAGTAAATCTAAGAGAAATGAAGAACAAAGGAAGACTCTTCAATTTTCTGAAACAATCGCTACATATGACAGCTTGCAGTCAAAAAGTGAAATTTCACAAAGTTCATCATTATCAGTAACTAAGATGAGTGCTGAATATCAGGCTTTCGTTGACTCCCTAACTCATGAAACATTAGAAAAAATTAGTCCACAACTCTCTGAAGAAAATCAGAAAGGACTTGGCTTAGGATCAGATAACTTTACAGTTAACCTCAAAGCCAAGGGTTTACAAGAATTCCCTAAGGACATTTTAAAAATCAAATATGTAAAATATCTCTATTTAGATGAGAATGAAATCAAAAGTTTTAAAGGGGCAGACTCCAGTGATCTGCTAGGACTTGAAATTCTATCCATGCAAGAAAATGGGTTATCATCACTTCCATCTGAAATTCAGTTACTTCATAATTTAAAGCTATTAAATGTCAGTCACAACCAAATATCACATATCCCTCAAGAAATATCACATCTTGGGACTATCAGGCAACTGTTTTTAAATAACAACTGCATTGAGGATTTTCCTTCTGGCTTGGAAAGTCTTGGAAACTTAGAAATTTTAAATTTGGCTAAAAATAAGTTAAGACATATACCAGATACCCTGTCTAGTTTGAAAAACTTGAGGGCTCTCAATCTGGAATATAATCAGTTAACAGTATTTCCTAAAGCTCTGTGCTTCCTTCCAAAGTTAATTTTACTAAACCTTTCTGGAAACCTGATAAACAGTTTGCCAAAAGAAATTAAGGAACTTAAAAATTTAGAAATACTTTTACTTGATCACAATAAACTTACCTTTTTGGCCGTGGAAATTTTTCAGTTGCTCAAAATGAAAGAACTCCAATTGACAGACAATAAATTGGAAGTTATTTCACACAAAATTGAGAATTTTAGGGAACTTAGGATTCTAATACTTGATAAAAATTTATTGAAAGACATACCAGAGAAAATTTCCCACTGTGTAATGTTGGAATGCCTTAGTCTTAGTGATAATAAGTTAACAGAACTTCCTAAGAACATCCATAAGCTTAAAAATTTAAGAAAACTCCATATAAACAGAAATAATATAGTGAAAATACCTGAATATATTTCACATCTTAATAATATGTTCAGCCTAGAATTTTCAGGAAATTTAATCGCAGACTTTCCTATTGAAATAAAAAACTGCAGAAAAATAACTAAAGTTGAATTGAGTTATAATAGAATAATGTATTTTCCACTAGGTTTGTGTGCTTTAGATTCTCTTTATTATTTGGGTTTTAATGGAAATTATATTTCAGAAATACCTGTAGATATATCTTTCAGTAAACAACTGCTTCATTTAGAATTGAATGAAAACAAACTCCTAATATTTTCTGAGCACTTATGTTCTCTTATTAATCTTGAATACCTTGATCTTGGTAAAAACAAAATAAGGAAAATTCAACCATCTATTTCCAATATGGTATCGCTCCGTGTTCTTATTTTATGCTGTAATAAGTTGGAAACTTTCCCTATAGAAGTGTGTACTTTAGAAAATTTGCAAGTACTTGATTTTTCAGAAAACCAAATACAGACTATTCCTTCAGAGATCTGTAACTTAAAAGGAATCCAGAAATTAAACATCTCAAGCAATCAATTTATATATTTTCCTATTGAACTTTGCCAACTTCAATCACTGGAAGAGCTGAATATAAGCCAGATAAATGGGAGAAAGTTAACAAGACTTCCGGAAGAGCTGTCTAATATGACTCAACTTAAAGGACTTGATATCTCAAATAATGCAATCAGAGAGATGCCAAGAAATATAGGGGAACTGAGAGGTTTGGTTAGTTTAAATGCATACAACAATCAAATAAGATATCTGCCACCATCTTTTCTATCTTTAAACGCTCTCCAGCAACTAAACTTGAGTGGAAATAATCTGACAGCTCTGCCTAGTGGTATCTACAACCTTTTTTCACTGAAGGAGATAAATTTTGATGATAACCCTTTGCTGAGACCTCCAATGGAAATCTGTAAAGGAAAACAATTGTATACTATTGCACACTATCTACAGAGGGCAGATGAGAGAGATGAGAAAATCTTAGCGAAGATCTTCAAGATAATTGCCAACAATATTACTGAAACAAATTTTCAATTTTTGTGTCAAAAACTAAACCTGGCRATCACAGAAACTGATAAGTCTACAACCACTGTTTCATTAAGTGAGAGAGTCCACCGAACACTTGATAAGTGGAAAATGGAAAATAACAACTTGTCAGTAACCACTGCTGCTCTAAGAGACCAACTAACTCGGGCACTAACTATGATAGGAGCATATGAAATTATGGACAAAATAACAGCTTTAAAACTTTTTACATGTGCAATTAAATTCTGA

Related Sequences

bmy_09336T0 SequenceType object (3)

Length: 870 aa      View alignments
>bmy_09336T0
MSEKKGTSEELEDLTSQFRKESRSRLVEESGVIKETSNSLKEASDGTTSNQICKARPRKNTLGICDDTSTSSSGSKSKRNEEQRKTLQFSETIATYDSLQSKSEISQSSSLSVTKMSAEYQAFVDSLTHETLEKISPQLSEENQKGLGLGSDNFTVNLKAKGLQEFPKDILKIKYVKYLYLDENEIKSFKGADSSDLLGLEILSMQENGLSSLPSEIQLLHNLKLLNVSHNQISHIPQEISHLGTIRQLFLNNNCIEDFPSGLESLGNLEILNLAKNKLRHIPDTLSSLKNLRALNLEYNQLTVFPKALCFLPKLILLNLSGNLINSLPKEIKELKNLEILLLDHNKLTFLAVEIFQLLKMKELQLTDNKLEVISHKIENFRELRILILDKNLLKDIPEKISHCVMLECLSLSDNKLTELPKNIHKLKNLRKLHINRNNIVKIPEYISHLNNMFSLEFSGNLIADFPIEIKNCRKITKVELSYNRIMYFPLGLCALDSLYYLGFNGNYISEIPVDISFSKQLLHLELNENKLLIFSEHLCSLINLEYLDLGKNKIRKIQPSISNMVSLRVLILCCNKLETFPIEVCTLENLQVLDFSENQIQTIPSEICNLKGIQKLNISSNQFIYFPIELCQLQSLEELNISQINGRKLTRLPEELSNMTQLKGLDISNNAIREMPRNIGELRGLVSLNAYNNQIRYLPPSFLSLNALQQLNLSGNNLTALPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTIAHYLQRADERDEKILAKIFKIIANNITETNFQFLCQKLNLAITETDKSTTTVSLSERVHRTLDKWKMENNNLSVTTAALRDQLTRALTMIGAYEIMDKITALKLFTCAIKF*