Part of scaffold_445 (Scaffold)

For more information consult the page for scaffold_445 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PEX1 ENSTTRG00000011336 (Bottlenosed dolphin)

Gene Details

peroxisomal biogenesis factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010748, Bottlenosed dolphin)

Protein Percentage 93.5%
cDNA percentage 94.58%
Ka/Ks Ratio 0.45413 (Ka = 0.0132, Ks = 0.0291)

PEX1 ENSBTAG00000024431 (Cow)

Gene Details

peroxisome biogenesis factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033778, Cow)

Protein Percentage 90.41%
cDNA percentage 91.49%
Ka/Ks Ratio 0.2326 (Ka = 0.0499, Ks = 0.2146)

PEX1  (Minke Whale)

Gene Details

peroxisomal biogenesis factor 1

External Links

Gene match (Identifier: BACU016857, Minke Whale)

Protein Percentage 99.03%
cDNA percentage 99.0%
Ka/Ks Ratio 0.18531 (Ka = 0.0046, Ks = 0.0248)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3834 bp    Location:668462..595929   Strand:-
>bmy_09341
ATGATGTGGGGCAGCGGTCGCCTGGCGGGTGCTGGGGGTGACGGGGCGGCCGTGACCGTGGTCTTCACCAACGCTCGCGACTGCTTCCTCCATTTGCCGCGGCGCCTCGTGGCCCAGCTGCATCTGCTGCAGAATCAAGCTATAGAAGTAGCCTGGGGTCACGAGCCTGCATTCTTGAGCTGGGTGGAAGGCAGACATTTTAGTGATCAAGGTGAAAATGTGGCTGAAATTAGCAGACAAGTTGGTCAGAAACTTGGACTTTCAAATGGGGAACAGGTGTTTCTCAAGCCTTGTTCCCATGTGGTGTCTTGTCAACAAGTTGAGGTGGAACCCCTCTCAGCAGATGATTGGGAGATACTGGAGCTGCATGCTGCTTCCCTTGAACAGCATCTTCTAGATCAAATTCGAATAGTTTTTCCAAAAGCCATTTTTCCTGTTTGGGTTGATCAGCAAACTTACATATTTATCCGGATTGTTGCACTAATACCAGCTGCTCCTTATGGAAGGCTGGAAACTGATAGCAGACTCCTTATTCAGCCAAAGACCCACGAAGCCAAAGAGAATACGTTTTCAAAAGCAGATAATGCACATGGAAAATTTCGTAATTATGGAGGAGACCAAAAAGGATTGACAAGAGAACTTCAAACCAAGCAACTTCAGTCAAATACTGTAGGAGTCACTGGGTCTAAAGAAACAGATTCAGAGGATACAATTGACTCATCCTTAATACCAAGCTTGTGGTCTGTGATGGGAAGCATTTTTTCTTTTGGGTCTGAGAAGAAACAAGACACCTCCTGGGGGGTAACTGAAATCAATGCATTCAAAACTATGCAGTCAAAAGTTGTTCCTCTGAACAATATTTTCAGAGTATGCAAATCTCAGCCTCCCAGCATATGTAATGCATCAGCAACTTCTCTGTTTCACAAACATTACGCCATTCATGTATTTCCATGGGACCAGGAATATTTTGATGTGGAGCCCAGCTTTACTGTGACCTATGGAAAACTAGTTAAACTACTTTCTCCAAAGCAACAGCAAAGTAAAACGAAGCAAAATGTCCTGTCACCTGAAAAAGAGAAGCAAATGTCAGAACCACTAGATCAAAAACAGAGTAGCCCAGACCATAGTCAAGAAGGTGGCAATGCCTGTGTGCTAAAGATTCCAGATGACCTGAGAAAGAGACTAAATATAGAAATGCATGCAGTAGTCAGAATAACTCCAGTGGAAATTACCCCTAAAATTCCAAGATTTCTAAAATTACAACCTAGAGAAAACTTACCTAAAGACATAAGTGAAGAAGACATAAAAACTGTGTTCTATTCATGGCTACAGCAGTCTACTACTACCACACTTCCTCTGATAGTATCAAAGGAAGAATATATTAAGTTGGAAATGAAAGATGGGTTGAAGGAGTTTTCTCTGAATATAGTTCATTCTTGGGAAAAGGAAAAAGAAGAAACTCTTTTTCTGTTGAGTACCAATCTGCTACAGAAGATGACAATAGAAGTCCTTCTGGATCCTATGGTAAAAGAAGAAAACAGTGAGGAAATTGACTTTATTCTTCCTTTTTTAAAGCTGAACTGCTTGGGAGGAGTGAACTCCTTAGGCGTCTCCTCCGTGGAGCACATCACTCATAGCCTCCTAGGACGCCCTTTGTCTCGGCAGCTGATGGCCCTTGTGGCAGGACTTAGAAACGGAGCCCTTTTACTCACGGGAGGAAAGGGGAGTGGAAAATCAACTTTAGCGAAGGCAATCTGTAAAGAAGCAGTTAACATATTGGATGCCCATGTGGAAATAGTTGACTGTAAAGCTTTACGAGGAAAAAGGCTTGAAAACATACAGAAAGCCCTAGAGGCGGCTTTCTCAGAGGCGGCGTGGCGGCAGCCTTCTGTTGTCCTGTTGGATGACCTGGATCTCGTCGCTGGCCTGTCTGCTCTTCCAGAACACGAGCACAGTCCCGAGGCTGTGCAGAGCCGGAGGCTCGCACATGCTTTGAACGATGTGGTGAAAGAGTTTATTTCCATGGGAAGTTTGGTGGCACTGATTGCTACAAGCCAGTCTCAACATTCTCTACATCCTTTACTTGTTTCTGCTCAAGGAATTCACATATTTCAGTGTGATCAAAGATGTGAAATTCTGTATAATGTAATAAAAAATAAACTAGACTGTGATATGAACAAGTTCACTGATCTTGATCTGCAGTGTATAGCAAAAGAAACTGAAGGGTTTGTGGCTAGAGATTTTACAGTGCTTATGGATCGAGCCATACATTCTTGTCTCTCTCATCAGAGTATATCCACCAGGGAAGAATTAGTTTTAACAACATTGGACTTGCGAAAGGCTCTCCGAGGATTTATTCCTGTGTCTCTGCGAAATGTCAACCTGCATAACCCTAGGGACCTGGGCTGGGATAAGATTGGCGGATTACACGAAGTTCGGCAGATACTTGTGGACACTATCCAGTTACCAGCCAAGTACCCAGAATTATTTGCAAACTTGCCCATACGACAAAGGACAGGAGTGCTGTTGTATGGTCCTCCTGGAACAGGAAAAACCTTATTAGCTGGAGGACCAGAGTTACTCAGCAAATATATTGGAGCAAGTGAACAAGCTGTACGGGATATTTTTATTAGAGCGCAGGCTGCAAAGCCCTGCATCCTTTTCTTTGATGAATTTGAATCTATTGCACCTCGACGAGGCCACGATAATACAGGAGTTACAGATCGTGTAGTTAACCAGTTGCTGACTCAGTTGGATGGAGTAGAAGGCTTACAGGGTGTTTATGTATTGGCTGCTACTAGTCGCCCTGATTTGATTGACCCCGCCCTGCTCAGGCCTGGCCGACTAGATAAATGCGTATACTGTCCTCCTCCTGATCAGGTGTCACGTCTTGAAATTTTAAACGTTCTCAGTGACTCTCTACCTCTGGCAGATGATGTGGACCTTCAGAACGTGGCATCAGTAACCAACTCCTTTACGGGAGCTGATCTGAAAGCTTTACTTTACAATGCCCAGTTAGAGGCCTTACATGGAAGGCTGCTGTCCTGTGGGCTGCAGGATGGAGGTTCCAGCTCTGATAGTGACCTGAGTCTGTCTTCAATGGTTTTTCTTAACCACAGCAGTGGCTCTGATGATTCAGCTGGAGATGGAGAATGTGGCTTAGAGCAGTCCCTTGTTTCTCTAGAGATGTCTGAGGTGCTTCCAGATGAATCAAAATTCAATATGTACCGGCTCTACTTTGGAAGCTCTTATGAATCAGAACTTGGAAACGGAACCTCTTCTGATTTGACAGAGCTGGCAGTAAGAGGAGCCGAAGTAGCCAGTGGTTGTGATTACCCTTTGGTTTCTTTCAGAACAGTTGAGGATAATGAGAAATTTGGTACAATAATGTCAAAAATTCTAACAACCAAGTGTTACCTATTGAGCTCACAATGCCTGTCAGCACCAAGCTCCATGACTCGGGATTTTCCTGGAGTTCCTGGGAAAGATCAGTCTTCACAACCCCCAGTCTTCAGAACAGCCTCACAAGAGGGTTATCAAGAGCTCACACAGGAACAAAGAGATCAACTGAGGGCAGATATCAGTATTATCAAAGGCAGATACCAAAGCCACATTGGAGAGGATGATGCCCTTAACCAACCAGGCCCCATCAGAACCAGTCTGGCTATTAGTCAGTCACATTTAATGACTGCGCTTAGTCACACAAGGCCATCCATCAGTGAAGATGACTGGAAGAACTTTGCTGAGCTGTATGAAAGCTTTCAAAATCCAAAGAAGAGAAAAAATCAAAGTGGAACAGTGTTTCGACCTGGACAGAAAGTAACTCTGGCATAA

Related Sequences

bmy_09341T0 Protein

Length: 1278 aa      View alignments
>bmy_09341T0
MMWGSGRLAGAGGDGAAVTVVFTNARDCFLHLPRRLVAQLHLLQNQAIEVAWGHEPAFLSWVEGRHFSDQGENVAEISRQVGQKLGLSNGEQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAASLEQHLLDQIRIVFPKAIFPVWVDQQTYIFIRIVALIPAAPYGRLETDSRLLIQPKTHEAKENTFSKADNAHGKFRNYGGDQKGLTRELQTKQLQSNTVGVTGSKETDSEDTIDSSLIPSLWSVMGSIFSFGSEKKQDTSWGVTEINAFKTMQSKVVPLNNIFRVCKSQPPSICNASATSLFHKHYAIHVFPWDQEYFDVEPSFTVTYGKLVKLLSPKQQQSKTKQNVLSPEKEKQMSEPLDQKQSSPDHSQEGGNACVLKIPDDLRKRLNIEMHAVVRITPVEITPKIPRFLKLQPRENLPKDISEEDIKTVFYSWLQQSTTTTLPLIVSKEEYIKLEMKDGLKEFSLNIVHSWEKEKEETLFLLSTNLLQKMTIEVLLDPMVKEENSEEIDFILPFLKLNCLGGVNSLGVSSVEHITHSLLGRPLSRQLMALVAGLRNGALLLTGGKGSGKSTLAKAICKEAVNILDAHVEIVDCKALRGKRLENIQKALEAAFSEAAWRQPSVVLLDDLDLVAGLSALPEHEHSPEAVQSRRLAHALNDVVKEFISMGSLVALIATSQSQHSLHPLLVSAQGIHIFQCDQRCEILYNVIKNKLDCDMNKFTDLDLQCIAKETEGFVARDFTVLMDRAIHSCLSHQSISTREELVLTTLDLRKALRGFIPVSLRNVNLHNPRDLGWDKIGGLHEVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQNVASVTNSFTGADLKALLYNAQLEALHGRLLSCGLQDGGSSSDSDLSLSSMVFLNHSSGSDDSAGDGECGLEQSLVSLEMSEVLPDESKFNMYRLYFGSSYESELGNGTSSDLTELAVRGAEVASGCDYPLVSFRTVEDNEKFGTIMSKILTTKCYLLSSQCLSAPSSMTRDFPGVPGKDQSSQPPVFRTASQEGYQELTQEQRDQLRADISIIKGRYQSHIGEDDALNQPGPIRTSLAISQSHLMTALSHTRPSISEDDWKNFAELYESFQNPKKRKNQSGTVFRPGQKVTLA*