Sequence detailsbmy_09378 (Coding sequence)

Part of scaffold_449 (SequenceType object (1))

For more information consult the page for scaffold_449 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC30A5ENSTTRG00000005753 (Bottlenosed dolphin)

Gene Details

solute carrier family 30 (zinc transporter), member 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005435, Bottlenosed dolphin)

Protein Percentage 88.18%
cDNA percentage 88.52%
Ka/Ks Ratio 0.26259 (Ka = 0.0068, Ks = 0.026)

SLC30A5ENSBTAG00000001013 (Cow)

Gene Details

zinc transporter 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001343, Cow)

Protein Percentage 95.4%
cDNA percentage 94.63%
Ka/Ks Ratio 0.15127 (Ka = 0.0226, Ks = 0.1497)

SLC30A5 (Minke Whale)

Gene Details

solute carrier family 30 (zinc transporter), member 5

External Links

Gene match (Identifier: BACU006222, Minke Whale)

Protein Percentage 99.28%
cDNA percentage 99.38%
Ka/Ks Ratio 0.23641 (Ka = 0.0034, Ks = 0.0142)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC30A5 (Human)   Slc30a5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2088 bp    Location:465229..495102   Strand:+
Raw sequence 
>bmy_09378
ATGGAGGAGAAATACGGCGGGGACGTGCTAGCCGGCCCCGGCGGCGGCAGCGGCGGCCTCGGGCCGGTGGACGTGCCCAGCGCTCGGTTAACGAAATATATCGTATTACTATGTGTCACTAAATTTTTGAAGGCTGTGGGGCTTTTTGAATCATATGACCTCCTAAAAGTAGTTCACATTGTTCAGTTTATTTTTATATTAAAACTTGGAATACCTAAGTGGATCAGAATATTTAAACATGCAGTTGCTGGGTGTATCATTTCACTTTTGTGGTTTTTTGGCCTCACTCTTTGTGGACCACTAAGGACTTTGCTGCTATTCGAGCACAGTGATATTGTTGTCATCTCACTGCTCAGTGTTTTGTTCACTAGTTCTGGAGGAGGACCAGCAAAGACAAGAGGGGCTGCTTTTTTCATTATTGCTGTGATCTGCTTATTGCTTTTCGACAATGATGATCTCATGGCTAAAATGGCTGAACACCCTGAAGGACATCATGACAGTGCTCTAACTCACATGCTTTACACAGCCATTGCCTTCTTAGGTGTGGCAGATCACAAGGGTGGAGTATTATTGCTAGTACTGGCTTTGTGTTGTAAAGTTGGTTTTCATACAGCTTCCAGAAAACTCTCTATAGATGTTGGTGGAACCAAACGTCTTCAAGCTTTATCCCATCTTGTTTCTGTGCTTCTCTTATGCCCATGGGTCATTGTTCTTTCTGTGACAACTGAGAGTAAAGTCGAGTCTTGGTTTTCTCTCATTATGCCTTTCACAACGGTTATTTTTTTTGTCATGATCCTGGATTTCTATGTCGATTCCATTTGTTCAGTCAAAATGGAAGTTTCCAAATGTGCCCGATATGGATCCTTTCCCATTTTTATTAGTGCTCTACTTTTTGGAAATTTTTGGACGCATCCAATAACAGACCAGCTTCGGGCCATGAACAAAGCAGCACACCAGGAGAGCACAGAACACGTCCTTTCTGGAGGAGTGGTAGTGAGCGCTATATTCTTCATTTTGTCTGCCAACATCTTATCATCTCCTTCTAAGAGAGGACAGAAAGGTACCCTAATTGGATATTCTCCTGAAGGAACACCTCTTTATAACTTCATGGGTGATGCTTTTCAGCATAGCTCCCAGTCAATCCCTAGGTTTATTAAGGAATCACTAAAACAAATTCTTGAGGAGAATGACTCTAGGCAGATCTTTTACTTCTTGTGCTTGAATCTGCTTTTTACCTTTGTGGAGTTATTCTATGGCGTGTTGACCAATAGTCTGGGTCTGATCTCAGATGGATTTCACATGCTCTTTGACTGCTCTGCTTTGGTCATGGGACTTTTTGCAGCCCTGATGAGTAGGTGGAAAGCAACTCGGATTTTCTCCTATGGGTATGGCCGAATAGAAATTCTCTCTGGATTTATTAATGGGCTTTTTCTAGTGGTAATAGCTTTTTTTGTGTTTATGGAATCAGTGGCTAGATTAATTGATCCTCCGGAATTAGACACACACATGTTAACACCAGTCTCAGTTGGAGGGCTGATAGTAAACCTTATTGGTATCTGTGCCTTTAGCCATGCCCATAACCATACCCATGGAGCTTCTCAAGGAAGCTGTCACTCATCTGATCACAGCCATTCACACCATGTGCATGGACACAGTGACCATGGGCACGGTCACAGCCACGGATCTGCAGGCAGAGGCATGAATGCTAACATGAGGGATGCCTGTCAGGTTCTCCTTCTGAGACTGCCACCAGAATATGAAAAAGAACTACATATTGCCTTAGAAAAGCTACAGAAAATTGAAGGATTAATATCATACCGAGATCCACATTTTTGGCGTCATTCTGCCAGTATTGTGGCAGGAACAATTCATATACAGGTGACATCTGATGCGCTGGAACAAAGAATAGTACAGCAGGTTACAGGAATACTTAAAGATGCTGGAGTAAACAATTTAACAATTCAAGTGGAAAAAGAAGCATACTTTCAACATATGTCTGGCCTAAGTACTGGATTTCATGATGTTCTGGCTATGACAAAACAAATGGAGTCCATGAAATACTACAAAGATGGGACTTACATCATGTGA

Related Sequences

bmy_09378T0 SequenceType object (3)

Length: 696 aa      View alignments
>bmy_09378T0
MEEKYGGDVLAGPGGGSGGLGPVDVPSARLTKYIVLLCVTKFLKAVGLFESYDLLKVVHIVQFIFILKLGIPKWIRIFKHAVAGCIISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGGGPAKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKGGVLLLVLALCCKVGFHTASRKLSIDVGGTKRLQALSHLVSVLLLCPWVIVLSVTTESKVESWFSLIMPFTTVIFFVMILDFYVDSICSVKMEVSKCARYGSFPIFISALLFGNFWTHPITDQLRAMNKAAHQESTEHVLSGGVVVSAIFFILSANILSSPSKRGQKGTLIGYSPEGTPLYNFMGDAFQHSSQSIPRFIKESLKQILEENDSRQIFYFLCLNLLFTFVELFYGVLTNSLGLISDGFHMLFDCSALVMGLFAALMSRWKATRIFSYGYGRIEILSGFINGLFLVVIAFFVFMESVARLIDPPELDTHMLTPVSVGGLIVNLIGICAFSHAHNHTHGASQGSCHSSDHSHSHHVHGHSDHGHGHSHGSAGRGMNANMRDACQVLLLRLPPEYEKELHIALEKLQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSDALEQRIVQQVTGILKDAGVNNLTIQVEKEAYFQHMSGLSTGFHDVLAMTKQMESMKYYKDGTYIM*