Part of scaffold_449 (Scaffold)

For more information consult the page for scaffold_449 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAD17 ENSTTRG00000002880 (Bottlenosed dolphin)

Gene Details

RAD17 homolog (S. pombe)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002701, Bottlenosed dolphin)

Protein Percentage 97.91%
cDNA percentage 98.26%
Ka/Ks Ratio 0.23256 (Ka = 0.0095, Ks = 0.0407)

RAD17 ENSBTAG00000002073 (Cow)

Gene Details

cell cycle checkpoint protein RAD17

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002682, Cow)

Protein Percentage 91.8%
cDNA percentage 94.07%
Ka/Ks Ratio 0.29189 (Ka = 0.0399, Ks = 0.1366)

RAD17  (Minke Whale)

Gene Details

RAD17 homolog (S. pombe)

External Links

Gene match (Identifier: BACU006216, Minke Whale)

Protein Percentage 99.17%
cDNA percentage 99.28%
Ka/Ks Ratio 0.2527 (Ka = 0.0038, Ks = 0.015)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1806 bp    Location:653342..682772   Strand:+
>bmy_09386
ATGCAGCTACCGGAAGGTGAATTATACTTTAATGTACTACAGGTTGTATGCTACGGATGGGAACTATTAAAGTTTATAATGTCAAAAACTTTTCTTAGACCAAAGGTATCTTCCACAAAGATAACAAACTGGGTAGACTCATCATTTGATGATTTTTCGGAGACTACAAGCATCTCTACTATTACTGCCACATCATTAGGTGTGAATAACTCAAGTCTTAGAAGAAAAAAGGTGTCTTCCACACTAGAAAGTAGCAAATTTCCAGCTAGAAAAAGAGGAAACCTATCTTCCTCAAAGCAGATTTATGGTCTAGAAAATTCAAAAGAATATCTGTCAGAAAATGAACCATGGGTGGATAAATACAAACCAGAAACGCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTTGAAACCTGGTTAAAAGCTGAAGTCTTAGAAAGGCAGCCAAAGCAGGGTGGATCTATTTTATTAATAACAGGACCCCCTGGATGTGGAAAAACAACAACTATAAAAATACTATCAAAGGAGCATGGTATTCAAGTACAAGAGTGGATTAATCCAGTTTTACCACAATTCCAAAATGATGATTTCAAGGAGATATTTAATCCTGAATCAAGCTTCCATGTATTTCCTTATCAGTCTCAGATAGCAGTTTTTAAAGAGTTTCTACTAAGAGCAACAAAATATAACAAACTACAGATGCTTGGAGATGATCTGAGAACTGATAAGAAGATAATTCTAGTTGAAGATTTACCTAACCAATTTTATCGAGATTCTCATACTTTACATGAAGTTCTGAGTTTCAACCCTGTGGCACCAACAATTATGATGAAATTTCTTAATCGAATAGTGACAAAAGAAGCTAATAAGGATGGAGGAAAGATTGTTGTCCCTGATAAAACTTCTCTAGAGTTGCTCTGTCAAGGATGTTCTGGTGATATCAGAAGTGCAATAAACAGCCTCCAGTTTTCTTCTTCAACAGGAAAGAACAATTTATGGCCAAGGAARAAACGAATGTCTTCATTAAAATCAGATGCTGTGCTGTCAAAATCAAAAGGAAGACAAAAACCTGATAGGATATTTGAAAATCAAGAGGTCCAAGCTATTGGTGGCAAAGATGTTTCTCTTTTTCTCTTCAGAGCTTTGGGGAAAATACTATATTGTAAACGAGCATCTGTAAAAGAATTAGACTCACCTCGATTGCCTTCTCATTTATCAGAGTATGAGCGGGATACATTGCTTGTTCAACCTGAGGAAGTAGTAGAAATGTCACACATGCCAGGAGAATTATTTAATTTATATCTTCACCAGAACTACGTAGATTTCTTCACGGAAGTGGATGATCTTGTGAGAGCCAGTGAATTTCTGAGTTTTGCAGATATCCTCAGTGGTGACTGGAATTATCGGGAAAATTGCCTGGCAGCAAAAGCACTTTTTTCTGACTTCTGCTTACCAGCTTTATGCCTCCAAACTCAGCTGTTGCCATACCTTGCTTTGCTAACCATTCCAATGAGAAATCAAGCACAAGGAAGATTGAAAATGGAAGCCCTGACTGACAGGGAACATGGAATGATAGACCTGGACAGTGGAGATGAAGCCCAGCCTAGTGGAGGGCAGCCTGCAGAGGAAGCGCTGGGTGAACGCACTCAAACAGCTGAACCTGAAACCTGGTCTCTTCCTTTGAGTCAGGATAGTGGGAGTGAACTGCCTGCCAGCCAGCCTCAGCCCTTTTCAGCCCAGAGAGACATGGAAGAAGAAGACATGATAATAGAAGACTATGAGAGTGATGAGACATAG

Related Sequences

bmy_09386T0 Protein

Length: 602 aa      View alignments
>bmy_09386T0
MQLPEGELYFNVLQVVCYGWELLKFIMSKTFLRPKVSSTKITNWVDSSFDDFSETTSISTITATSLGVNNSSLRRKKVSSTLESSKFPARKRGNLSSSKQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAEVLERQPKQGGSILLITGPPGCGKTTTIKILSKEHGIQVQEWINPVLPQFQNDDFKEIFNPESSFHVFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHEVLSFNPVAPTIMMKFLNRIVTKEANKDGGKIVVPDKTSLELLCQGCSGDIRSAINSLQFSSSTGKNNLWPRKKRMSSLKSDAVLSKSKGRQKPDRIFENQEVQAIGGKDVSLFLFRALGKILYCKRASVKELDSPRLPSHLSEYERDTLLVQPEEVVEMSHMPGELFNLYLHQNYVDFFTEVDDLVRASEFLSFADILSGDWNYRENCLAAKALFSDFCLPALCLQTQLLPYLALLTIPMRNQAQGRLKMEALTDREHGMIDLDSGDEAQPSGGQPAEEALGERTQTAEPETWSLPLSQDSGSELPASQPQPFSAQRDMEEEDMIIEDYESDET*