Part of scaffold_449 (Scaffold)

For more information consult the page for scaffold_449 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000005080 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004775, Bottlenosed dolphin)

Protein Percentage 95.64%
cDNA percentage 97.45%
Ka/Ks Ratio 0.50057 (Ka = 0.0208, Ks = 0.0415)

SMN1 ENSBTAG00000005743 (Cow)

Gene Details

Survival motor neuron protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007547, Cow)

Protein Percentage 90.67%
cDNA percentage 91.54%
Ka/Ks Ratio 0.21858 (Ka = 0.05, Ks = 0.2286)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 825 bp    Location:910431..890093   Strand:-
>bmy_09393
ATGGCGATGGGTGGCGGCGGCGGCAGCAGCAGTGGCGTCCCAGAGCCGGAAGACTCGGTGCTGTTCCGGCGCGGCACAGGCCAGAGTGATGATTCTGACATTTGGGATGATACAGCATTGATAAAAGCTTATGATAAAGCTGTGGCTTCATTTAAGCACGCTCTAAAGAACGGTGACATTTCCGAAGTTTCAGAAAAACCAAAAGGCACACCTAAAAGAAAACCTGCTAAGAAGAATAAAAGCCAAAGAAAGAATACCACAGCTCCCTTGAAGCAGTGGAAAGTTGGTGACAAATGTGCTGCCATTTGGTCAGAAGATGGCTGTGTTTACCCAGCTACCATTGCCTCGATTGACTTTAAGAGAGAAACCTGTGTTGTCATTTACACTGGATATGGAAATAGAGAGGAGCAAAATCTGTCTGATCTACTTTCCACAACCTCTGAAGTAGCTAATAATATAGAACAGAATGCTCGGGAGAATGAAAATGAAAGTCAAATTTCAACAGATGAAAGCGAGAACTCCTCCAGATCTCCTGTAAATAAACCAAATAGCATCAAGTCAAACGCTGCTGCATGGAACTCTTTTCTCCCTCCACCACCCCATATGCCAGGATCAGGTCTGGGACCAGGAAAGCCAGGTCTAAAATTCAGTGGCCCGCCGCCGCCGCCACCCTTCCCGTCATGCTGGCTGCCTCCATTTCCTTCTGGACCACCAATAATTCCCCCACCACCTCCCATATGTCCAGATTCTCTGGATGATGCTGATGCTTTGGGAAGTATGTTAATCTCTTGGTACATGAGTGGTTATCATACTGGTTACTATATG

Related Sequences

bmy_09393T0 Protein

Length: 275 aa     
>bmy_09393T0
MAMGGGGGSSSGVPEPEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDISEVSEKPKGTPKRKPAKKNKSQRKNTTAPLKQWKVGDKCAAIWSEDGCVYPATIASIDFKRETCVVIYTGYGNREEQNLSDLLSTTSEVANNIEQNARENENESQISTDESENSSRSPVNKPNSIKSNAAAWNSFLPPPPHMPGSGLGPGKPGLKFSGPPPPPPFPSCWLPPFPSGPPIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYM