Part of scaffold_449 (Scaffold)

For more information consult the page for scaffold_449 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BDP1 ENSTTRG00000011415 (Bottlenosed dolphin)

Gene Details

B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010849, Bottlenosed dolphin)

Protein Percentage 92.57%
cDNA percentage 94.46%
Ka/Ks Ratio 0.51758 (Ka = 0.0335, Ks = 0.0647)

BDP1 ENSBTAG00000000363 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000474, Cow)

Protein Percentage 79.22%
cDNA percentage 87.58%
Ka/Ks Ratio 0.52858 (Ka = 0.1184, Ks = 0.224)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 7005 bp    Location:944542..1028145   Strand:+
>bmy_09396
ATGTTCCGCAGGGCACGCCTTAGCGTGAAGCCCAATGTCAGGCCTGGAGCAGGCGCCAGGGGCTCCACCGCCCCCAATCCACAGCGTGAACGAGAGGCTCCTAGGCCGCCGGAGCCTGCAGCGGCCTCTGTCCCGAAGCCAGCGGAATCCACAGATGTGCCCCCGGTGGATTGCGGGGAAGCGGAGCCCCGAGAAAAGACTCCCAAGAGCAGTGATGAAAAGACTGATGGTGGGAAGGATGTTGAAGAATCCAGTAAATCTTCCTCTACCATTTCACAGAGAAGAAAGCGAGTATCAAGTACTTCTAGTCTGGTTAAACCTAGTGTCAGTGTTCCTTCAGAACCTCATGCTTTATCTACAGTTAATCAAGAAGCTCCACAGCCAAACCCTGTTCCAACAAAAGAGAAACAGCCATGCTCAGACAGATACCGAATATATAAAGCCCAGAAACTGAGAGAAATGTTAAAAGAAGAATTGAGGAAAGAGAAGAAGCAATGGAAAAACAAATATGCTGTAAATGAAAGTCAGAGGCCACCAGATCGTTCCAAAATGACTATGAGAGACTTCATATATTACCTGCCAGATAACAATCCAATGACTTCTTCACTGGAGCAAGAAAAGAAAACTGAAAAATCATTGACACCAGTCCAGACAAGAGAGCAAGAAGGTAAGAGTACTCCTGATGGTGAAGATAATGAAGAAATAGAAGAGGAGATGGATGATGGGCCATTGCTGGTTCCTCGAGTAAAAGTGGCAGAAGATGGTTCTATTATTTTGGATGAAGAAAGTTTAACTGTAGAAGTTTTAAGGACGAAAGGCCCCTGTGTTGTTGAGGAAAATGACCCCATATTTGAGCGTGGTTCTACAACTACATACTCCAGCTTTAGGAAAAACTATTACTCTAAACCATGGTCAAATAAAGAAACAGATATGTTTTTTTTGGCCATCAGCATGGTAGGAACTGACTTTTCTATGATTGGACAGCTTTTTCCTCACAGAGCAAGGATAGAAATTAAGAATAAATTTAAACGTGAGGAGAAAACAAATGGATGGAGAATAGACAAAGCATTCCAGGAAAAGCGCCCTTTTGACTTCGATTTTTTTGCTCATTTGCTTCAGAAAGTTCTTGCTGAAGAAGAGAAAAGAAAACAAAAATCTGTTAAAAATCAGACTTCAAAGGAGAAGAAGTCCTCTAAATCACGGAAAAATGTAAAAGTGAAAAAAGTTGCCAGTGAAAGAGTGAATGATAATCCAGATGAGTCTGTGAGCACTAGAATTTCAGACACAGAAGGATCTCAAAAGGATGCTCAGACAGTTGAAGAAGAACAACAGTCTCTGACTTTATCAGGACAGGATTCAGAACAGAATGCATTAGAACAAGATATAAATCAAAAGAAAAGGAGAAGAAAGAATCAGGATGAAGGTAGTGAACAAGAGGTGAATCTTTCAGGAAATGCCACTGTTCAGCCAGGCTCTTCTAAAGGAGAAAAACACAAAAATAAATGCCTGTCTTTAAGTCCTGAGATAAATGAAGATGAAAGCAATAAGGAACAAAAGCTTCCCTGTGTACAGAACACAGATGACACTTATAAAATGGTTCTTTTCCCGATATATTTTCATTTCCGTAGTAGTCAACAAGATGCCGTATCAGTAGCAACTGAGACTTCAGAATCAAGCACTTCAGATTTGCCTTCATCAGAAGGTGGGATTAGAGCATTGTGTGAGGTGAATAATGCTGAGAGTAGTTGTACAGAAGAAGGAAATGGTGACCTAAAAGATAAAGCACTGGAAACTGATCAAACAGAAAGTATTAAACCGATGACAAGAGGACGACTCCAGAGACCTAAACCCAATTTATCAAGGGCAGTTGGGAAGAAATCAGTTCTTTCACAAGGGAAAACAGATGCAGAGAACAAGAGTTTACATACAGAAACTTCGGTTGAAAAGGAAGATGATCAACTAAAGGCTTTCAGACCTGCACGCCTAATGAGGGGCTTATTGCAAAGGCCAAAGCCAAATGTAGGTAAAGCTGCTGAAAGAAAAGAAACTGTTACATCACAGGAAAAAATTGGGGCCAGTGYAGAAAAGAATGAAAATGAGTCCTGTATTGATAGAGATACTCCTGAACAAATAGAAGATCAGTCATGTAAAAATTTTGATTGTGAAGACATCACATCACAACCTGAAAAAAAAGATACTTCTTTTCAAAATGTRCAGTCAGATGAGCCCAAGGCTCTTAATGAATGTCTAAGTATTCAAGAGGATAATAAAGCAAATAAACAAGTTCAAATTCTAAAGACTCGATTTCAGAAACCAAAGCCAAATATAGGAAGAAGAACTGGAAGAAGAGAAATTTTCTCAAAAGAAGAAGAGGTACCAAAGGAAGTTCTTGCCTCCGAGGAGACGACAGCAGCTTTGAGAGAAACTGCAAGATTGGAAACCTCACCAAGGGAAAAGGTGCCTGGGGAGACTAATACTGCTAAGGAAATGGAGCCAGATTTAAAAGAAACTGAAAGAAAAGATATCTCTACCAGGGAGAAAATACCAGAAATGATTGATGTCACTGTGGAAATGGAGACAGATTTGAGACAGACTGGAAGAGAGATTTTCCCAAGGGAGAAGATAACAAAGGTGACTGATGCCACTGAGGAAAGAGAGACAGATTTGGAAGAGACTGAAAGAAGAGGAATATCCCTACAGGAAAATGCCCCGGAGGAGGTCGATACTATTGGTGAAGTGAAGACAGGTTTGAAAGAAACTGGAAGAGAGATTTCTCCGAGGGAGAAGATACCAGAGATGATTGATGCCGCTGAGGAAGTAGAGACAGATTTAGAAGAAACTGAAAGAAGAGAAATACCTACACAAGAAAAGACCTCAGGGCTCAAAACTATAGATGATGAAATGGAGACAGATTTGAACAAAATTGGAATAGAAATTTCCCCAAGGGAAAATGTACTAGTGGGGATCAGTGCCACAGGGGAAAGGGAGATTGATTTGGAAGAAACTGGAAAAAGAGACATTTCCCTGATGGAGAAGGTATCAGGAAAGATGACTGCCATTGAGGAAACAGAGGCAGATTTGAAAGAAACTGGAAGAGAAATTTCCTTGAGGAAAAGCGGATCAGAAGAGATCAGTGCTTCTGAGGAAAAGGTGGCAGATTTGGAAAGAACTGGAAAAATAGACATTTCTCTAACGGAAAATGAACCAGAGGAGACTGGGACCTCAAGACAAACTGAGACAGATTCATTGCAGAGGGGTAGTGGTGACTGCAGTGCTGTGCCTTCACTAAATATTAAAGACATTAGCAGTGAAGTACAATCCGTGGTGCATGTATCTGTAGAAGAAAAAAGAAATTCTGAAAAGGAAATATCAAGTCAGTTGAGTCATTTGAACATTTCTTCACAGACTTCTGAGCTTGATAAAATAGAAGACCAGAGGATGCGATCTCCAGATGTTCCAGAGCAGTTTTCAGATATTAATTTAAGCAAATCTCTTCCTCAAGAACAGAAGCCATTTGAAGTGAAACCAGCACCTTTTGTGAGAAGTAGATTCAAAAGACCAAAACCAAACTTAGCAAGAGCAGCTTCAAAAAGAGAGACTATAGAAGCAGAAAAACACGCACCTGGGAAGAAAGTGGAAGCTGATAAAAAAGGGACTGTTGTGATACAGCAGAATGGAGAACAAACGAGAACTTTCCCTTCTCAACGTACTGAAAAGGACCTTTCCCCTTCGAGTTCTTGTGAACCTATAGAGGAGTCTCAGTCTACACAAGCCCAGGAAAAGGAATTAGTTGTCTCTATGGAGACTTATCATATACACACTTGCGAACAAGAAATGAAGGAAAGCGTTATCCAAACTGCTCCACCAGTAAGGGGCCGACTTCAGAGACCCAGTCCAAACTTAAGAAAGGTTGGACAGAGGCAAGTAATAGAAAAAAGTGAAGCCAAAGAAACAATTAAGGAAGAAAGGACGCTACAAAAAGATGAAACTAAAAAATTCCTGACTGTGCCAAATTCTCAAATTGCAACGGACATTGAAGTTGTATCCTCCAAAGTTTCAGAAGGCAGAATGTATGAAAACCAGAGTCACGTTCTTTTAGAAAACCTTCACGTTAACAAAATAAATGTTTCAGATGAAAAGACGAGACATGAACATAAAACGTATGTTCCTAGTCCACCACAAATGATAAGAAGGCAATTCCAAAAGGCTAAGCCAAATTTGGGAAGAGCACAAGGTAAGAAAGAGGAATCAGACATAGAAAAAGACAGAGCAGATCAGAGTAAGGCAAGGAAGCCAGAAGATAATTTGCTGCAGCATGGAGATTCTGACACCCAGCTTCTTCAAAAAGGAAAAGCTGAGTTTCTGACATCTCTGGAGATTTCAGCAAGAAAAGGTTCTGTAGGTTCCAAGGAGATTGGTTTGGCAAAAAAAGATGCTCAATCAGAAGTTGGACCATCAGGAAGTGTTGGAGAGAAAACCGTAGACGATAATTCTATGTGTTCAGTTGTCGAAGAGCAGTATGTCAGTAAACCAGCAAGCTCTCCACAACTGTTAAAAGAATCAAATTATTCTAAAATTGCTGTGGATCGAAGAACAGCTCTCTCTTCTGCCTCTGAATGTAAGATAGATCGTAGTGAAAGGAGAATGCGTCGAAAGATTAAACCAAACGTCCCCAAAGGGCGTGGATCAAAACGAATTCGGAGTAAGACCTCTAAGAAGGAACCTAGAGCTTCTAAGCCTGTGCTGGTGACTCTTCGAGCTTCCCAGGAAGAAGACGAAGATGATGTGGAAGACTTTGAGTCTGACTATGAAGAAGAAAGCTATCATCTTGCTCCAGAAGAAGTAAACAAAGCTCCAGTGTTTGTACCTGTTGGTCTCAGATCTCCTGAACCGGTTTCTGCTCAGATTGAGGAAACCATGGAAGAGCTTGAAATACCCATGAATATCCCAGATGTAGGATGCATAGCTGTTGTTGAACATCAGCTCTCATCAAACATAGATTTGACTACTCAGGAAATGAAACAAGAAGAAAATTTGAATGCATTATCAATTGAAATGACCACAGGTGAACATTCCCAAGTTGAAACAGGTACCAACGATGGAAGCACTGAAGCTGCCATAACTTTACTTACAATGGGAGGTCTGGTGTTGCAGTCAGAGATCAGTACAGAACAGAGTGACGTAGGAGTATGTGTACTTCCTGATGTTCATTCAAACGATAAAAGCCATATTCCGTTTTGCCCAGATAATACAAATCTCAAAATTGTTCATGAATGTCAGGAACCTTCTTCACCTATCCGTAGTACATCTCCATCAGTAGAAGAAAACAAGATTATATTGGATGAACAAAGTACTAAAGAAGAAATTGGTTTAATGGAAGAAGTAAAGGAAAACTCTATATCATCCAGGACAACTTCAGAAGTGACCAATAATTTGAGAATGAGAAGTAGATTTGCCAAGCCTAAGCCAAATCTTAAGAAAATTTTAGGGACCAGCAGGTTTGGTGCTCATCAGGAAGTTCCCAGTTTGTTTGTAACTGAAGGAGAAGTGGAAATTCAAAGAGAAACTGAGAAAAATGCTTCTAAAGGAAGAGAATTAGAAGATAAAAACCTTGAATCAGTTACAACAGCAGAGAGTAAGGCGCAGAGCAAATTGGCATCTGTACACGGTATTGAAGAAACCAGTATTTCACAAGAAGCACGCCTAACTGGAAGAGATGAAGATGAAGAAGGGAGGTCTGCAGAGGTGCAGCTGTCTTCATTTGCCCCCGTTGTTTCGTCTGAGTCAAGGCCCCACACACTTGGTTTGGGTATGGGTCTTGGTGAGAGTTCTTTCGAAGAGCCCCTGGGAAAGGACTCTAACGGAGACAGTGTGCTTATACTTCATGTGCCAGAGTGTAGTATTCCAGAAGTCCAACAAGAGAATATAAACAATCCTCAAGACCTAACAGTTGCTAATGTACATCAAGAAGGTGAGGATGAACAAGCATTCATTTTAACTCTGGTGGAAATCCCAACCAATGCAGTAGAAGAATTTGCTGATACCACTATGCAGTTAATGCCAAACCCTTTACTGCCAGCCCCCATATTGGTCAAATCAGTGAATACAGAAGAAAGGGGGGACATGAGTATCAGTTTTCCAGTAACTTCAGCTGGTCAGGATGACATGTGTTTATCTAATTCTGGAAGAGATGATTCCGAAAAGCCTCCTGCTAATTTGGATCTTGTATCTAGGAAGAGATTTCATTGTAGGCTTGACGAAAGTGACCATGTTCCTCCTGCCAAAAAAAGTTCACTCACTTTAAGAGACGATTGTCAAAAATATACCTCTGAGGTGTGTTCAAAGGAATTAATAAATGTTTTGGAGAAAACAGGAGAGTCTTACAAGGGACAAGGTATCTTCCCTACCTCAGGAAACACGCATACAATTCCAGAACCTCAGAAAGAGCAACTTGAACCAACTTTTCAGAGTATCAGATCTAAACCTCTTGATAAAATAACAGATACACAAGAAAAGAATACATCTCAGTTACCTCAGGATGAGATAGTGGTGTCTGATAAGGAAAAAAGAACTTGTGCTGCTTCTAAGTCTGAACAAATGGATAGCATCACATCGTCTTCAAAAACCCCACTATCCAGTTTGGAGTCTGATGAACCTACTCAGGTTCATAGCAAGAAACGCCTGAAACCTCTTATACCTGTATCAAGACAGAATCTGAAAAGATCTAATCCGCTCAATACAAGCCAGAAAAAAACTCAAGAGTCCTCTGATCTTCCATCTCCAAGTGTTGTTGTTAATACTCAACCTAAAAATATTGATAGTTCAGCAACTCAGGGTTTTTTTGTTTTTTTGGATGAATATTCAGTTTTAATTATTTTTACCCCTGAGATTATGGGATTTGTATGGGAAAAAAAACCCTTAACTTTATTTATGAGGCAAATTTCCATACAAAACTCTGTCTCCATTACACACACATATGCTCACATACACACATTCCTTCTTTAA

Related Sequences

bmy_09396T0 Protein

Length: 2335 aa      View alignments
>bmy_09396T0
MFRRARLSVKPNVRPGAGARGSTAPNPQREREAPRPPEPAAASVPKPAESTDVPPVDCGEAEPREKTPKSSDEKTDGGKDVEESSKSSSTISQRRKRVSSTSSLVKPSVSVPSEPHALSTVNQEAPQPNPVPTKEKQPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKYAVNESQRPPDRSKMTMRDFIYYLPDNNPMTSSLEQEKKTEKSLTPVQTREQEGKSTPDGEDNEEIEEEMDDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDFDFFAHLLQKVLAEEEKRKQKSVKNQTSKEKKSSKSRKNVKVKKVASERVNDNPDESVSTRISDTEGSQKDAQTVEEEQQSLTLSGQDSEQNALEQDINQKKRRRKNQDEGSEQEVNLSGNATVQPGSSKGEKHKNKCLSLSPEINEDESNKEQKLPCVQNTDDTYKMVLFPIYFHFRSSQQDAVSVATETSESSTSDLPSSEGGIRALCEVNNAESSCTEEGNGDLKDKALETDQTESIKPMTRGRLQRPKPNLSRAVGKKSVLSQGKTDAENKSLHTETSVEKEDDQLKAFRPARLMRGLLQRPKPNVGKAAERKETVTSQEKIGASXEKNENESCIDRDTPEQIEDQSCKNFDCEDITSQPEKKDTSFQNVQSDEPKALNECLSIQEDNKANKQVQILKTRFQKPKPNIGRRTGRREIFSKEEEVPKEVLASEETTAALRETARLETSPREKVPGETNTAKEMEPDLKETERKDISTREKIPEMIDVTVEMETDLRQTGREIFPREKITKVTDATEERETDLEETERRGISLQENAPEEVDTIGEVKTGLKETGREISPREKIPEMIDAAEEVETDLEETERREIPTQEKTSGLKTIDDEMETDLNKIGIEISPRENVLVGISATGEREIDLEETGKRDISLMEKVSGKMTAIEETEADLKETGREISLRKSGSEEISASEEKVADLERTGKIDISLTENEPEETGTSRQTETDSLQRGSGDCSAVPSLNIKDISSEVQSVVHVSVEEKRNSEKEISSQLSHLNISSQTSELDKIEDQRMRSPDVPEQFSDINLSKSLPQEQKPFEVKPAPFVRSRFKRPKPNLARAASKRETIEAEKHAPGKKVEADKKGTVVIQQNGEQTRTFPSQRTEKDLSPSSSCEPIEESQSTQAQEKELVVSMETYHIHTCEQEMKESVIQTAPPVRGRLQRPSPNLRKVGQRQVIEKSEAKETIKEERTLQKDETKKFLTVPNSQIATDIEVVSSKVSEGRMYENQSHVLLENLHVNKINVSDEKTRHEHKTYVPSPPQMIRRQFQKAKPNLGRAQGKKEESDIEKDRADQSKARKPEDNLLQHGDSDTQLLQKGKAEFLTSLEISARKGSVGSKEIGLAKKDAQSEVGPSGSVGEKTVDDNSMCSVVEEQYVSKPASSPQLLKESNYSKIAVDRRTALSSASECKIDRSERRMRRKIKPNVPKGRGSKRIRSKTSKKEPRASKPVLVTLRASQEEDEDDVEDFESDYEEESYHLAPEEVNKAPVFVPVGLRSPEPVSAQIEETMEELEIPMNIPDVGCIAVVEHQLSSNIDLTTQEMKQEENLNALSIEMTTGEHSQVETGTNDGSTEAAITLLTMGGLVLQSEISTEQSDVGVCVLPDVHSNDKSHIPFCPDNTNLKIVHECQEPSSPIRSTSPSVEENKIILDEQSTKEEIGLMEEVKENSISSRTTSEVTNNLRMRSRFAKPKPNLKKILGTSRFGAHQEVPSLFVTEGEVEIQRETEKNASKGRELEDKNLESVTTAESKAQSKLASVHGIEETSISQEARLTGRDEDEEGRSAEVQLSSFAPVVSSESRPHTLGLGMGLGESSFEEPLGKDSNGDSVLILHVPECSIPEVQQENINNPQDLTVANVHQEGEDEQAFILTLVEIPTNAVEEFADTTMQLMPNPLLPAPILVKSVNTEERGDMSISFPVTSAGQDDMCLSNSGRDDSEKPPANLDLVSRKRFHCRLDESDHVPPAKKSSLTLRDDCQKYTSEVCSKELINVLEKTGESYKGQGIFPTSGNTHTIPEPQKEQLEPTFQSIRSKPLDKITDTQEKNTSQLPQDEIVVSDKEKRTCAASKSEQMDSITSSSKTPLSSLESDEPTQVHSKKRLKPLIPVSRQNLKRSNPLNTSQKKTQESSDLPSPSVVVNTQPKNIDSSATQGFFVFLDEYSVLIIFTPEIMGFVWEKKPLTLFMRQISIQNSVSITHTYAHIHTFLL*