Part of scaffold_454 (Scaffold)

For more information consult the page for scaffold_454 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOOK1 ENSTTRG00000004675 (Bottlenosed dolphin)

Gene Details

hook homolog 1 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004416, Bottlenosed dolphin)

Protein Percentage 89.75%
cDNA percentage 90.89%
Ka/Ks Ratio 0.46161 (Ka = 0.079, Ks = 0.1711)

HOOK1 ENSBTAG00000030671 (Cow)

Gene Details

protein Hook homolog 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033333, Cow)

Protein Percentage 88.82%
cDNA percentage 88.46%
Ka/Ks Ratio 0.27396 (Ka = 0.0836, Ks = 0.3052)

HOOK1  (Minke Whale)

Gene Details

hook microtubule-tethering protein 1

External Links

Gene match (Identifier: BACU000215, Minke Whale)

Protein Percentage 89.91%
cDNA percentage 91.3%
Ka/Ks Ratio 0.54173 (Ka = 0.0788, Ks = 0.1455)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1935 bp    Location:213409..148485   Strand:-
>bmy_09414
ATGGCACAAGTTCTTCATCAAATTGATGTAGCTTGGTTCAATGAATCTTGGTTAAGCCGAATTAAAGAGGATATCGGTGACAACTGGCGAATAAAGGCTAGTAATTTAAAGAAGGTACTTCAAGGAATTATGGGTTATTACAATGAGTTTTTGGGACAACAGATTTCTGAAGAACTTATCCCTGATTTAAACCAAATAACTGAATGTTCAGATTCTGTGGAGCTTGGGAGGTTGCTCCAGCTTATTTTAGGTTGTGCTGTCAACTGTGAAAAGAAGCAAGAACATATTCAAAATATAATGACACTGGAAGAGTCTGTTCAACATGTGGTCATGACTGCTATTCAGGAGTTGATGAGTAAAGAAATAGTGAGCTCTCCTACAAATGATGCTGTTGGAGAATTAGAGCAACAGCTTAAAAGGGCCCTGGAAGAACTTCAGGAAGCACTAGCAGAAAAAGAAGAACTGAGGCAAAGATGCCAAGAACTAGATATGCAGGTGACAGCACTTCAAGATGAAAAGAATTCACTAGTTTCTGAGAATGAGATGATGAATGAAAAACTTGACCAGTTGGATGGCTCTTTTGATGATCCAAATACAATGGTTGCAAAAAAGTATTTTCATGCACAGTTGCAACTAGAACAATTACAGGAAGAAAACTTCAGGCTCGAAGCTGCAAAAGATGATTACCGTGTTCACTGTGAAGAACTTGAAAAGCAATTAATTGAATTTCAACATAGGAATGATGAATTGACTAGTCTTGCTGAGGAAAYAAGAGCCCTGAAAGATGAAATAGACGTTCTTAGGGCTACCTCTGATAAAGCAAATAAACTGGAGTCAACAGTTGAGATATATCGTCAGAAGCTACAAGATCTGAATGACCTTCGCAAGCAGGTGAAAACTTTACAGGAAACAAACATGATGTATATGCATAATACAGTCAGCTTAGAAGAAGAATTAAAGAAGGCAAATGCAGCACGTACACAATTAGAAACATACAAGAGACAGGTTCAGGATCTTCACGTTAAACTTTCCTCTGAATCCAAAAGGGCGGACACACTAGCATTTGAAATGAAGCGGCTTGAAGAAAAACATGAAGCTTTACTTAAGGAAAAAGAGAGACTAATAGAACAGCTTGATACTCTGAAAGAAACAAATGAAGAGCTTCGATGTTCACAAGTACAACAGGATCACCTAAACCAAACAGATGCATCTGCTACAAAAAGCTATGAGAATCTTGCTGCTGAGATTATGCCAGTGGAGTATAGGGAGGTGTTTATTCGACTGCAACATGAAAATAAGATGCTTCGATTACAGCAGGAAGGTACTGAGAACGAACGTATTGAAGAACTTCAGGAGCAGCTGGAACAGAAGCAGCGCAAGATGAATGAATTGGAAACTGAGCAGAGGCTGAGCAGAGAACAAATTCGAGAATTGCAGCAGCAGATTGAGGACCTCCAGAAATCTTTGCAAGAACAAGGCTCCAAGTCTGAAGGAGAAAGTTCCAGCAAACTAAAGCAGAAGTTGGAAGCTCATATGGAAAAACTAACGGAGGTCCATGAAGAATTACAGAAGAAACAAGAGCTCATTGAAGACCTCCAGCCAGATGTAAACCAGAATGTACAAAAGATCAACGAACTTGAAGCTGCTCTTCAGAAGAAAGATGAAGATATGAAAGCAATGGAGGAAAGATACAAAATGTACTTAGAGAAAGCAAGAAATGTGAGTGGCTTATCTTTCAGGGTTTTAGTCTTTGTGACTTGGGTTCTAATTGGGCCTATCCCACCTCTTCTTGGATCTATGTCACATCGCTTTGCTCSCYACTACCCTGCCTTGCCAGTCAGGTTCTTGGTGCGTCTCCACCTCAGTCCTCATGTTCTTTCCCTCTCACTCATCAGCATCAGAAAATACTACACATGGCTTCATAGGGACAGTTAA

Related Sequences

bmy_09414T0 Protein

Length: 645 aa      View alignments
>bmy_09414T0
MAQVLHQIDVAWFNESWLSRIKEDIGDNWRIKASNLKKVLQGIMGYYNEFLGQQISEELIPDLNQITECSDSVELGRLLQLILGCAVNCEKKQEHIQNIMTLEESVQHVVMTAIQELMSKEIVSSPTNDAVGELEQQLKRALEELQEALAEKEELRQRCQELDMQVTALQDEKNSLVSENEMMNEKLDQLDGSFDDPNTMVAKKYFHAQLQLEQLQEENFRLEAAKDDYRVHCEELEKQLIEFQHRNDELTSLAEEXRALKDEIDVLRATSDKANKLESTVEIYRQKLQDLNDLRKQVKTLQETNMMYMHNTVSLEEELKKANAARTQLETYKRQVQDLHVKLSSESKRADTLAFEMKRLEEKHEALLKEKERLIEQLDTLKETNEELRCSQVQQDHLNQTDASATKSYENLAAEIMPVEYREVFIRLQHENKMLRLQQEGTENERIEELQEQLEQKQRKMNELETEQRLSREQIRELQQQIEDLQKSLQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDVNQNVQKINELEAALQKKDEDMKAMEERYKMYLEKARNVSGLSFRVLVFVTWVLIGPIPPLLGSMSHRFAXXYPALPVRFLVRLHLSPHVLSLSLISIRKYYTWLHRDS*