Part of scaffold_452 (Scaffold)

For more information consult the page for scaffold_452 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHISA4 ENSTTRG00000005970 (Bottlenosed dolphin)

Gene Details

shisa homolog 4 (Xenopus laevis)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005645, Bottlenosed dolphin)

Protein Percentage 68.42%
cDNA percentage 68.42%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0359)

SHISA4 ENSBTAG00000030805 (Cow)

Gene Details

shisa homolog 4 (Xenopus laevis)

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041108, Cow)

Protein Percentage 94.63%
cDNA percentage 92.62%
Ka/Ks Ratio 0.05628 (Ka = 0.0203, Ks = 0.3615)

SHISA4  (Minke Whale)

Gene Details

shisa family member 4

External Links

Gene match (Identifier: BACU019090, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.13%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0302)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 609 bp    Location:359464..362116   Strand:+
>bmy_09422
AGGCCTCTGGGCGCAGCGACCAGGGTGGAGCTCCGGGGAGTGGGAGTGGGGCTGGGCGGCCACTGGGTACCCCCGTCCGTGCCCACAGCGCTGGCCGGCGAGGACTGCCTGTGGTACCTGGACCGGAATGGCTCCTGGCATCCGGGCTTCAACTGCGAGTTCTTCACCTTCTGCTGCGGGACCTGCTACCAGCGGTACTGCTGCCGGGACCTGACCTTGCTCATCACCGAGAGGCAGCAGAAGCACTGCCTGGCCTTCAGTCCCAAGACCATAGCGGGCATCGCCTCCGCCGTGATCCTCTTCGTGGCCGTGGTCGCCACCACCATCTGCTGCTTCCTCTGTTCCTGCTGCTACCTGTACCGCCGGCGCCAGCAGCTGCAGAGCCCATTTGAAGGCCAGGAGATCCCAATGACAGGCATCCCAATGCAGCCGGTGTACCCGTACCCCCAGGACCCCAAAGCTGGCCCTGCAGCCCCACAGCCTGGCTTCATGTACCCACCTAGTGGTCCTGCACCCCAGTATCCACTCTACCCGGCGGGGCCCCCTGTCTACAACCCTGCAGCTCCTCCCCCATATATGCCACCCCAGCCCTCCTACCCGGGAGCCTGA

Related Sequences

bmy_09422T0 Protein

Length: 203 aa      View alignments
>bmy_09422T0
RPLGAATRVELRGVGVGLGGHWVPPSVPTALAGEDCLWYLDRNGSWHPGFNCEFFTFCCGTCYQRYCCRDLTLLITERQQKHCLAFSPKTIAGIASAVILFVAVVATTICCFLCSCCYLYRRRQQLQSPFEGQEIPMTGIPMQPVYPYPQDPKAGPAAPQPGFMYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQPSYPGA*