Part of scaffold_452 (Scaffold)

For more information consult the page for scaffold_452 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LMOD1 ENSTTRG00000005971 (Bottlenosed dolphin)

Gene Details

leiomodin 1 (smooth muscle)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005646, Bottlenosed dolphin)

Protein Percentage 74.68%
cDNA percentage 81.47%
Ka/Ks Ratio 0.25036 (Ka = 0.162, Ks = 0.647)

LMOD1 ENSBTAG00000021576 (Cow)

Gene Details

leiomodin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028746, Cow)

Protein Percentage 67.68%
cDNA percentage 76.21%
Ka/Ks Ratio 0.20263 (Ka = 0.2151, Ks = 1.0617)

LMOD1  (Minke Whale)

Gene Details

leiomodin 1 (smooth muscle)

External Links

Gene match (Identifier: BACU009795, Minke Whale)

Protein Percentage 76.66%
cDNA percentage 79.94%
Ka/Ks Ratio 0.33505 (Ka = 0.1003, Ks = 0.2993)

Genome Location

Sequence Coding sequence

Length: 1404 bp    Location:370432..366219   Strand:-
>bmy_09423
ATGGGAACCCTGCAGAGGGCAGCGGGACCGTGTGCCGTGGGCACGGCCGGGGGCCTGACCTCCGTCTGGGGGGTGGGCCACAGCCCCAGCTCACCCACAGCTCCTCGAGGGGACAGCATCTGTGATGGAACCACTCTGAACCCAGGGGGACGGGGAGGGGGAGAGGGGCTCCCTGGCCAGACAGAGGGCAAGCAAGTGGAGACCAAGACAGATTCCAAGAAGGGAGAGGAAAGGGGCAGAGATGCCAGCAAAAAGCCCCTGGGCCCCAGACGGGACTCAGACCTGGGGAAGGAGCCAAAGAGGGGTGGTTTGAAGAAAAGCTTCTCAAGAGACAAGGACGAAGCTGAAGGCAAAGGCGCAGAGAGGCCCAAGGAGGAGAAGCTCGTCAGGGGCCTCGAGAAGGGCCGGGTCAGGGCCGCGGTGGACAAGAAGGAGGCCGGGAAGGAGGGGCGGGCGCAGGAGGGGACGGCAGCCCCCAGGAAGGGCGAGGAGAGGCAGGGGAGTGTGAACGGAGACAAGGGGAAGAAGGGAGAGGAGAAGAAGGAAGCAAGCCAGACAGAGGAGGCCGAGAAGGTGCAGGGGCAGAGGAAGGACACGGACACCCGGACGGAGGGCCAGGAGGCGGAGAGAGGCAGCAGGGACAGGGGTGCCAGGCCAGAGGACGAGAAGGCCAGAAAGGAGGAGCCCCGCCGTGCAAAGGCCCCCCGCGAAGAGAGCAAGAGCCCGGCGGCGCCGGAGAGATCAGCCCCTGGAGCCCCCGCCGAGCCCGCCGACGGGCCGGCCCAGGCTGAGGAGGAGGCGGCCCCCAGCGTCTTTGACGAGCCCCTGGAGAGGGTGAAGAGCAACGACCCGGAGGTGACCGAGCTCAACGTGAACAACTCGGACTGCATCACCCCCGAGATCCTGGTGCGCTTCGCCGAGGCGCTGGAGTTCAACACGGCCGTCAAGGTCTTCGCCTTGGCCAACACSCGGGCGGACGACCACGTGGCGTTCGCCATCGCCATCATGCTCAAGGCCAACAAGACCATCACCAGCCTGAACCTTGACTCCAATCACATCACCGGCAAGGGCATCCTGGCCATCTTCCGGGCCCTCCTGCAAAACACCTCGCTGACCGAGCTCCGCTTCCACAACCAGCGCCACATCTGCGGCGGCAAGACCGAGATGGAGATGGCCACGCTGCTCAAGGAGAACACCACGCTGCTCAAGCTGGGCTACCACTTCGAGCTGGCCGGGCCCCGCATGACCGCTCTCCACAAATGTCTCATACCTGGAGCTGAGGTTTCTGGACAAGAAGAGTCCTTTCAGCACGTGACCGAGAAGACGGCACGCCTGGGGCCCATGCGGCTGGCAAGCTGCCAAAGTCCTAGGATCCAGAAACGATGTCTCCCAGGGACCACGTGA

Related Sequences

bmy_09423T0 Protein

Length: 468 aa      View alignments
>bmy_09423T0
MGTLQRAAGPCAVGTAGGLTSVWGVGHSPSSPTAPRGDSICDGTTLNPGGRGGGEGLPGQTEGKQVETKTDSKKGEERGRDASKKPLGPRRDSDLGKEPKRGGLKKSFSRDKDEAEGKGAERPKEEKLVRGLEKGRVRAAVDKKEAGKEGRAQEGTAAPRKGEERQGSVNGDKGKKGEEKKEASQTEEAEKVQGQRKDTDTRTEGQEAERGSRDRGARPEDEKARKEEPRRAKAPREESKSPAAPERSAPGAPAEPADGPAQAEEEAAPSVFDEPLERVKSNDPEVTELNVNNSDCITPEILVRFAEALEFNTAVKVFALANTRADDHVAFAIAIMLKANKTITSLNLDSNHITGKGILAIFRALLQNTSLTELRFHNQRHICGGKTEMEMATLLKENTTLLKLGYHFELAGPRMTALHKCLIPGAEVSGQEESFQHVTEKTARLGPMRLASCQSPRIQKRCLPGTT*