Part of scaffold_455 (Scaffold)

For more information consult the page for scaffold_455 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HTR1F ENSTTRG00000002871 (Bottlenosed dolphin)

Gene Details

5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002691, Bottlenosed dolphin)

Protein Percentage 99.09%
cDNA percentage 98.69%
Ka/Ks Ratio 0.12131 (Ka = 0.0041, Ks = 0.034)

BT.27991 ENSBTAG00000039151 (Cow)

Gene Details

5-hydroxytryptamine receptor 1F

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051984, Cow)

Protein Percentage 97.58%
cDNA percentage 95.56%
Ka/Ks Ratio 0.09005 (Ka = 0.0128, Ks = 0.142)

HTR1F  (Minke Whale)

Gene Details

5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled

External Links

Gene match (Identifier: BACU000066, Minke Whale)

Protein Percentage 99.09%
cDNA percentage 99.19%
Ka/Ks Ratio 0.45074 (Ka = 0.0045, Ks = 0.0101)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 993 bp    Location:830850..831842   Strand:+
>bmy_09454
ATGACGACGACCATTAACTCACTTGTGATCGCTGCAATTATTGTGACCCGAAAGCTACACCACCCAGCCAACTACTTAATTTGCTCCCTTGCAGTCACAGATTTTCTTGTAGCTGTCCTGGTGATGCCTTTCAGCATTGTGTATATTGTGAGAGAGAGCTGGATTATGGGGCAAGTGGTCTGTGACATCTGGCTGAGCGTTGACATYACGTGCTGCACTTGCTCCATCTTGCATCTCTCTGCTATAGCTTTGGATCGGTACCGGGCAATCACAGATGCTGTTGAGTATGCCAGGAAAAGGACTCCCAARCATGCTGGCATTATGATTACCATAGTTTGGATTATATCTATTTTTATCTCTATGCCTCCTCTATTCTGGAGGCACCAAGGAACTAGCCGAGAGGATGAGTGCATCATCAAACACGACAACATTGTTTCCACTATTTACTCAACATTTGGAGCTTTCTACATCCCATTAACATTGATTTTGATCCTCTACTACAAAATATATAAAGCAGCAAAGACGTTATACCACAAGAGACAAGCAAGTAGGATTGCCAAGGAGGAACTGAATGGTCACCTTTTGGGGAGTGGTGAGAAAAGCATTAGACTGGTCTCCACACCATACATGCTAGAAAAGTCTTTATCTGATCCATCAACGGACTTTGATAAAATTCATAGCACAGTGAAAAGCCCCAGGTCTGAATTCAAGCATGAGAGATCTTGGAGAAGGCAAAAGATCTCAGGCACAAGAGAACGCAAAGCAGCCACTACCCTGGGATTAATCTTGGGTGCATTTGTAATATGTTGGCTTCCATTTTTTGTAAAAGAATTGGTTGTTAATGTCTGTGAAAAGTGTAAAATTTCTGAAGAAATGTCAAATTTTTTGACATGGCTTGGATATCTCAATTCCCTTATAAACCCACTGATTTATACAATCTTTAATGAAGACTTCAAGAAAGCATTCCAAAAACTTGTGCGATGTCGATGTTAG

Related Sequences

bmy_09454T0 Protein

Length: 331 aa      View alignments
>bmy_09454T0
MTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISIFISMPPLFWRHQGTSREDECIIKHDNIVSTIYSTFGAFYIPLTLILILYYKIYKAAKTLYHKRQASRIAKEELNGHLLGSGEKSIRLVSTPYMLEKSLSDPSTDFDKIHSTVKSPRSEFKHERSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC*