Sequence detailsbmy_09521 (Coding sequence)

Part of scaffold_469 (SequenceType object (1))

For more information consult the page for scaffold_469 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PHF13ENSTTRG00000006346 (Bottlenosed dolphin)

Gene Details

PHD finger protein 13

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006005, Bottlenosed dolphin)

Protein Percentage 74.85%
cDNA percentage 72.8%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1186)

PHF13ENSBTAG00000015384 (Cow)

Gene Details

PHD finger protein 13

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020441, Cow)

Protein Percentage 98.18%
cDNA percentage 93.94%
Ka/Ks Ratio 0.02807 (Ka = 0.0081, Ks = 0.2876)

PHF13 (Minke Whale)

Gene Details

PHD finger protein 13

External Links

Gene match (Identifier: BACU001109, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.39%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0302)

Additional orthologs identified in other species via the OPTIC pipeline.

PHF13 (Human)   Phf13 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 498 bp    Location:659031..654704   Strand:-
Raw sequence 
>bmy_09521
ATGGGGGGCTTGCTGCAGCTGGAAGCCGCTGACCCATATGCAGAGACCCCCACGAGCCCTACCCTGCAGGATATCCCCCAGGCCCCTGGCGACCCCTGCTCGGGCTGGGACTCCGACACTCCTTCCAGTGGATCTTGTGCCACGGTGTCACCGGATCAGGTCAAAGAGATAAAAACTGAAGGCAAACGGACTATCGTCCGGCAGGGCAAGCAGGTGGTATTCCGGGACGAGGACAGCACCGGCAACGATGAGGACATCATGGTGGATTCAGACGACGACTCCTGGGACCTCGTCACCTGCTTCTGCATGAAGCCATTTGCTGGCCGCCCCATGATAGAGTGTAATGAGTGCCATACCTGGATTCACCTGTCCTGTGCGAAAATCCGGAAGTCCAACGTTCCGGAAGTGTTTGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGACATCCGCCGTTCCAACCGGTCCCGAATGGGCTCCCGGAAGCTGTTTCTGGACTGA

Related Sequences

bmy_09521T0 SequenceType object (3)

Length: 166 aa      View alignments
>bmy_09521T0
MGGLLQLEAADPYAETPTSPTLQDIPQAPGDPCSGWDSDTPSSGSCATVSPDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSDDDSWDLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRMGSRKLFLD*