Part of scaffold_469 (Scaffold)

For more information consult the page for scaffold_469 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHD5 ENSTTRG00000010468 (Bottlenosed dolphin)

Gene Details

chromodomain helicase DNA binding protein 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009941, Bottlenosed dolphin)

Protein Percentage 87.34%
cDNA percentage 89.69%
Ka/Ks Ratio 0.3089 (Ka = 0.0882, Ks = 0.2857)

CHD5 ENSBTAG00000040477 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010688, Cow)

Protein Percentage 84.88%
cDNA percentage 84.63%
Ka/Ks Ratio 0.16183 (Ka = 0.1098, Ks = 0.6784)

CHD5  (Minke Whale)

Gene Details

chromodomain helicase DNA binding protein 5

External Links

Gene match (Identifier: BACU001121, Minke Whale)

Protein Percentage 88.81%
cDNA percentage 90.77%
Ka/Ks Ratio 0.32963 (Ka = 0.0792, Ks = 0.2403)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5685 bp    Location:1003246..1048126   Strand:+
>bmy_09538
ATGGCTGAGTGGGGCCTGGACGACGTGGATTACCTGTTCTCGGAGGCCGACTATCACACGCTGACCAACTACAAGGCCTTCAGCCAGTTCCTCAGGTGGGCCTCGGGGCCACCATGGCTGGGCATCCACAGAGACTGCCCTCGAGGCCTGCCTCCCCCGGGGGCACCAAGTGGGGTGGCCAGAGGGACAGGGTCCCGGGCTCCTGGGGTGTGGGACTTGGGAGAAGGGTGGGCCCTGCGGGGGGTCACATGGGGGTCTCATCCCCTCCATGGGGCTGTCCTCACCCTCCTGCCTCTCCCCCCACGCAGGCCACTCATCGCCAAGAAGAACCCGAAGATCCCCATGTCCAAAATGATGACCGTCCTGGGCGCCAAGTGGCGGGAGTTCAGCGCCAACAACCCCTTTAAGGGCAGCTCGGCGGCGGCAGCCGCAGCGGCAGTGGCCGCGGCCGTGGAGACAGTCACCATCGCGCCTCCGCTGGCCATCAGCCCCCAGCAGGCACCCCAGCCTGTGCCCGTCCGCAAGGCCAAGACCAAGGAGGGCAAGGGTAAGGCTGCACCCAGTCCTGCTGGCAGAGGGCCCCCAGGCCCTACAGTCTGGGACAGCCGGGCCGGTCTCTATCAAGGACCCAGTGCCTTGGTTGACCTTGGACCCACCCACCCTTCCTCAGCTGTGTTGTGGCATCTGTCCTGCCTCTCTCTTGGGGCTGGTGGTGAAGTGGAGGAGGTGAGCGAGGAGGAGGAGCGGGAGGAGTCGGACTTCGACAGCGCCAGCATCCACAGCTCCTCCGTGCGCTCTGAGTGTTCCGCCCTGCTGGGGAGGAAGAGCAAGAGGAGGCGCCAGAAGAAGAGAAGTACGACTCCTGTCTGCAGGGTTCCCGTGGCCACCACGGTGGATGTGGGCGTGCAGAGCCCCCTCGGGGAGCGGAGAAGGGCACCCTCAGGCCTCAGCAGGCAGCTCCCCTGTGCTTCCTCAGCCACCCTGGCCTCTGTGGTTAGGAGAGGGGGTCCTGTCGAAGTGAGTCTGCATACGTTAGGGACCCTTGATGACGGTGACGGCTATGAGACGGACCACCAGGACTACTGTGAGGTGTGCCAGCAGGGTGGGGAGATCATCCTGTGCGACACCTGCCCGAGGGCCTACCACCTCGTCTGCCTGGACCCAGAGCTGGAGAAAGCTCCCGAGGGCAAGTGGAGCTGTCCCCACTGTGAGAAGGAGGGGATCCAGTGGGAGCCGAAGGACGACGACGACGACGAGGAGGAGGGCGGCTGCGAGGAGGAGGAGGACGACCACATGGAGTTCTGCCGCGTGTGCAAGGACGGCGGCGAGCTGCTCTGCTGCGACGCCTGCCCCTCCTCCTACCACCTGCACTGCCTCAACCCGCCGCTGCCCGAGATCCCAAACGGTGAATGGCTCTGCCCGCGCTGTACTTGTCCCCCGCTGAAGGGCAAAGTCCAGCGGATCCTGCATTGGAGGTGGACAGAGCCCCCAGCCCCCTTCATGGTGGGGCTGCCGGGGTCCGACGTAGAGCCTGGCGTTCCACCACCCAAGCCCCTAGAGGGCATCCCGGAGAGAGAGTTCTTTGTCAAGTGGGCTGGGCTCTCCTACTGGCACTGTTCCTGGGTGAAGGAGCTACAGTTGGAGCTCTACCACACGGTGATGTATCGCAACTACCAAAGAAAGAACGACATGGATGAGCCACCGCCCTTTGACTACGGCTCTGGCGATGAGGATGGCAAGAGCGAGAAAAGGAAGAACAAGGACCCCCTCTACGCCAAGATGGAGGAGCGCTTCTACCGCTATGGCATCAAGCCCGAGTGGATGATGATCCACCGCATCCTGAACCACAGGTGTGTGCTCGGCGGGTGGGGCCCTGAACCTCGCTGGAGGCTAGCCGTGGCACCCCTGGCCCTGCAGCGCTGCCCCGGCTCGGTTGCCCAGTGCACTCAGGGCACCGACACCATCCTGGCTGATGAGATGGGTCTGGGCAAGACAGTGCAGACCATCGTCTTCCTCTACTCCCTGTACAAGGAGGGCCACTCCAAGGGGCCCTACCTGGTCAGTGCGCCCCTGTCCACCATCATCAACTGGGAACGTGAGTTTGAGATGTGGGCGCCCGACTTCTACGTGGTCACCTACACGGGGGACAAGGAGAGCCGCTCTGTGATCCGGGAGAACGAATTTTCGTTTGAGGACAACGCCATTCGGAGTGGGAAGAAGGTGTTCCGGATGAAGAAAGAAGTGCAGATCAAATTCCACGTCCTGCTCACCTCCTACGAGCTCATCACCATCGACCAGGCCATCCTGGGCTCCATCGAGTGGGCCTGCCTCGTGGTGGATGAGGCCCACCGGCTCAAGAACAACCAGTCCAAGGTAGGAAGTGCTGACCGCTGGCTCCGGTGCTTCCTGGATGGGCCGGCCGCCTGGTGCCCCCTGACAGGCCCCCTGTCCCCCCTCCCCAAGTTCTTTAGGGTGTTGAACAGCTACAAGATCGATTACAAGCTGCTGCTGACGGGGACCCCCCTTCAGAACAACCTGGAGGAGCTCTTCCACCTCCTCAATTTCCTGACTCCAGAGAGGTTCAACAACCTGGAGGGCTTCCTGGAGGAGTTTGCCGACATCTCCAAGGAAGACCAGATCAAGAAGCTGCATGACCTTCTGGGGCCGCACATGCTAAGGCGGCTCAAGGCTGATGTATTCAAGAACATGCCGGCCAAGACCGAGCTGATCGTCCGCGTGGAACTGAGCCAGATGCAGAAGAAGTACTACAAGTTCATCCTCACGCGGAACTTTGAGGCGCTGAACTCCAAGGGGGGTGGGAACCAGGTGTCACTGCTCAACATCATGATGGACCTGAAGAAGTGTTGCAACCACCCTTACCTCTTCCCTGTGGCCGCTGTGGAGGCCCCTGTCCTGCCCAATGGCTCCTATGATGGCAGCTCTCTGGTCAAGTCGTCAGGGAAGCTCATGCTGCTGCAGAAGATGCTCAAGAAACTGCGGGACGAAGGGCACCGTGTGCTTATCTTCTCCCAGATGACCAAGATGCTGGACCTCCTGGAGGACTTCCTGGAGTATGAGGGCTACAAATATGAGCGGATTGATGGTGGCATCACCGGGGGCCTCCGGCAAGAGGCGATTGACAGATTCAACGCCCCTGGGGCCCAGCAGTTCTGCTTCCTCCTCTCGACCCGGGCAGGTGGCCTGGGCATCAACCTGGCCACGGCGGACACGGTCATCATCTATGACTCAGACTGGAACCCGCACAATGACATCCAGGCCTTCAGCCGCGCCCACCGCATCGGGCAGAACAAGAAGGTGATGATCTACCGCTTCGTGACGCGGGCCTCGGTGGAGGAGCGTATCACGCAGGTGGCCAAGCGCAAGATGATGCTCACCCACCTGGTGGTGCGGCCCGGCCTGGGCTCCAAGTCCGGCTCCATGACCAAGCAGGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGAGCTCTTCAAGGACGACGTGGAGGGTGGGTATCCCGGGTGCCGGGGCACGGGGGGGTGGTCCTGCTCGAGACACTCCCTTCCCAGGGCATCTCCAGGGCGGAGATGCGCGCTGGCCCCGCCCTCACGGAGCCCATGGCACCTGCGTCCCCAGGAGGAGGTGGAGCGGGAGATCATCAAGCAGGAGGAGAACGTGGACCCCGACTACTGGGAGAAGCTGCTCCGGCACCACTATGAACAGCAGCAGGAGGACCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGCAGGTCAACTACAACGACGCCTCCCAGGAGGACCAGGAGTGGCAGGACGAGCTCTCAGACAACCAGTCCGAATATTCCATTGGATCCGAGGACGAGGACGAGGACTTTGAAGAAAGGCCAGAAGGGCAGAGTGGACGGCGACAATCCAGGAGGCAGCTGAAGAGCGACAGGGACAAGCCCCTGCCCCCGCTTCTCGCCCGGGTCGGCGGCAACATTGAGGTGCTGGGCTTCAACGCCCGACAGCGGAAGGCCTTTCTGAACGCCATCATGCGCTGGGGCATGCCCCCCCAGGACGCCTTCAACTCCCACTGGCTGGTGCGGGACCTTCGCGGGAAGAGTGAGAAGGAGTTTAGAGCCTATGTGTCCCTCTTCATGCGGCACCTGTGTGAGCCGGGGGCTGACGGCGCGGAGACCTTCGCAGACGGCGTGCCCCGCGAGGGCCTCTCCAGGCAGCACGTGCTCACGCGCATCGGGGTCATGTCACTAGTTAGGAAGAAGGTTCAGGAGTTTGAGCACGTCAATGGGAAGTACAGCACCCCGGATTTGATCCCTGAAGGGCCCGAGGGCAAGAAGCCAGGCGAGGTCATCTCCTCGGATCCCAACACACCAGTGCCCGCCAGCCCTGCCCACCTTCTGTCTGCCCCGCTGGGCCTGCCAGAGAAAATGGAAGCCCAGCTGGGCTACTTGGAAGAGAAGGAGCTGGGGGTGCAGAAGCCAAAGAAGCCCCCAGAAATCCAGGCCCTGCCAGCTGCCCTGGACAGAGCGGAGGGTGAGGACAAGCACGAGAACTCGGAGGGCAAGGAGAGGGCCCGAGAGGAGCGACTGGAGGAGACAGAGAAGGCCCAGCCCTCCCCCGAGCAGCTGCCGAAAGAAGAAGTGCTTGCTGAGAAGGAGAAGATTCTGGACAAGTTGGAGCTGAGCTTGATTCACAGCAGAGGCGATGGCAGTGATTTCAGGCCAGAGGAAGATGAGGAGGGGAAGAGGGAGGACAAGATCGGGAAGTTCAAGTTCATGTTCAACATTGCAGACGGGGGCTTCACAGAGCTACACACACTGTGGCAGAACGAGGAACGTGCTGCTGTGTCCTCGGGGAAAATCTACGACATCTGGCACCGGCGCCATGACTACTGGCTGCTGGCGGGCATCGTGACGCACGGCTATGCCCGTTGGCAGGACATCCAGAACGACCCGAGATACATGATCCTCAACGAGCCCTTCAAGTCCGAGATCCACAAGGGCAACTACCTGGAGATGAAGAACAAATTCCTGGCCCGCAGGTTCAAGCTGCTGGAGCAGGCGCTGGTCATCGAGGAGCAACTCCGGAGGGCCGCGTACCTCAACATGACCCAGGACCCCAACCACCCCGCCATGGCCCTCAATGCCCGCCTGGCCGAGGTGGAGTGCCTTGCCGAGAGCCACCAGCACCTGTCCAAGGAGTCCCTCGCCGGGAACAAGCCTGCCAATGCCGTCCTGCACAAGGTCCTGAACCAGCTGGAGGAGCTGCTGAGCGACATGAAGGCGGATGTGACGCGCCTGCCCTCCATGCTGTCCCGCATCCCCCCGGTGGCCGCCCGTCTCCAGATGTCAGAGCGCAGCATCCTGAGCCGCCTGACCAACCGAGCCGGGGACCCCACCATCCAGCAGGGCGCTTTCGGCTCTTCCCAGATGTACAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTGGACCGGGAGGGATTGTCAACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGCCGCGCCTGCCGGGCCCCCTGCCCGACCCCCGCAGGAGAGAAAAGCTGCCGCCTTTCTAGAGCCACGCCACCCGAGGACAGAAAGGGAAACTGAGAAATGCCACCTCATGGGGACAAGGCCGCCTGAGCCCAGAAGTGCCACCTGCTCCTAA

Related Sequences

bmy_09538T0 Protein

Length: 1895 aa      View alignments
>bmy_09538T0
MAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRWASGPPWLGIHRDCPRGLPPPGAPSGVARGTGSRAPGVWDLGEGWALRGVTWGSHPLHGAVLTLLPLPPRRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPVRKAKTKEGKGKAAPSPAGRGPPGPTVWDSRAGLYQGPSALVDLGPTHPSSAVLWHLSCLSLGAGGEVEEVSEEEEREESDFDSASIHSSSVRSECSALLGRKSKRRRQKKRSTTPVCRVPVATTVDVGVQSPLGERRRAPSGLSRQLPCASSATLASVVRRGGPVEVSLHTLGTLDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGSDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHRCVLGGWGPEPRWRLAVAPLALQRCPGSVAQCTQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKVGSADRWLRCFLDGPAAWCPLTGPLSPLPKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGGYPGCRGTGGWSCSRHSLPRASPGRRCALAPPSRSPWHLRPQEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAHLLSAPLGLPEKMEAQLGYLEEKELGVQKPKKPPEIQALPAALDRAEGEDKHENSEGKERAREERLEETEKAQPSPEQLPKEEVLAEKEKILDKLELSLIHSRGDGSDFRPEEDEEGKREDKIGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYSNNFGPNFRGPGPGGIVNYNQMPLGPYVTAAPAGPPARPPQERKAAAFLEPRHPRTERETEKCHLMGTRPPEPRSATCS*