Part of scaffold_465 (Scaffold)

For more information consult the page for scaffold_465 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAN3 ENSTTRG00000002814 (Bottlenosed dolphin)

Gene Details

PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002637, Bottlenosed dolphin)

Protein Percentage 95.48%
cDNA percentage 95.0%
Ka/Ks Ratio 0.06727 (Ka = 0.0026, Ks = 0.0382)

BT.17386 ENSBTAG00000009912 (Cow)

Gene Details

PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae); Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013076, Cow)

Protein Percentage 99.1%
cDNA percentage 96.14%
Ka/Ks Ratio 0.02603 (Ka = 0.0041, Ks = 0.1575)

PAN3  (Minke Whale)

Gene Details

PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU018663, Minke Whale)

Protein Percentage 95.84%
cDNA percentage 96.14%
Ka/Ks Ratio 0.38792 (Ka = 0.0301, Ks = 0.0777)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1662 bp    Location:601205..566001   Strand:-
>bmy_09562
ATGTCGTTGTCTGCTGGATCTTCCCCTCTTCACTCCCCCAAGATCACTCCGCATACTTCTCCTGCCCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAACTTACATGGTGCCTTCTAGTGCCTCTACACCGGTTAATAATCCTGTTTCTCAGACTCCATCTTCTGGTCAGGTGATCCAAAAGGAAACCGTCGGTGGGACGACTTACTTCTATACAGACACAACTCCAGCACCTTTGACTGGAATGGTTTTTCCAAACTACCATATTTATCCTCCAACTGCACCTCATGTTGCTTATATGCAACCAAAAGCGAATGCACCTTCCTTCTTCATGGCTGATGAACTCCGACAGGAGCTGATTAACAGACATTTAATAACAATGGCTCAGATTGATCAAGCAGATATGCCAGCAGTCCCTACAGAAGTTGACAGCTACCATAGCCTGTTCCCTCTAGAACCACTGCCACCACCCAACCGGATACAGAAATCAAGTAATTTTGGATACATTACGTCCTGCTACAAAGCTGTAAATAGCAAAGATGACCTGCCTTATTGCCTTCGGAGGATACATGGTTTTCGTCTTGTTAACACAAAGTGCATGGTATTGGTGGACATGTGGAAGAAAATCCAGCACTCAAATATCGTGACCTTGCGTGAAGTGTTTACCACTAAAGCTTTTGCAGAGCCTTCTCTTGTGTTTGCATATGATTTCCACGCTGGAGGAGAGACTATGATGAGCAGACACTTTAATGACCCTAATGCGGACGCCTATTTCACGAAGAGAAAGTGGGGTCAACACGATGGACCATTGCCCAGACAGCATGCTGGATTATTGCCAGAATCTCTTATTTGGGCATATATTGTCCAACTGAGTTCTGCATTGCGTACCATTCATACAGCAGGTTTGGCATGTCGAGTTATGGACCCAACAAAGATTCTGATAACTGGCAAAACAAGGTTGCGAGTAAATTGTGTTGGAGTTTTTGATGTTTTAACATTTGATAACAGTCAGAATAATAATCCATTGGCATTAATGGCTCAATACCAGCAAGCAGATCTGATATCATTAGGAAAAGTTGTGTTGGCTTTGGCTTGCAACTCTTTGGCAGGAATTCAGCGAGAGAATTTACAGAAAGCCATGGAACTGGTGACAATCAACTACTCCTCTGACCTGAAGAATCTGATTTTATATTTGTTGACTGACCAAAACAGGATGCGAAGTGTAAATGACATCATGCCCATGATTGGTGCTCGATTTTATACTCAATTGGATGCTGCTCAAATGAGAAATGATGTCATAGAGGAAGACCTTGCAAAGGAGGTTCAAAATGGAAGACTGTTTAGGCTTCTAGCAAAATTGGGAACAATCAATGAGAGGCCGGAGTTTCAGAAGGATCCTACCTGGTCGGAGACTGGAGACCGTTATCTGTTGAAACTCTTTAGGGATCATCTTTTTCATCAGGTGACAGAAGCGGGCGCTCCTTGGATTGACCTCAGTCATATCATTTCTTGTCTTAACAAGTTAGATGCTGGTGTGCCAGAAAAAATAAGCCTCATTTCCAGAGATGAGAAGAGTGTACTTGTGGTGACTTACAGTGACTTAAAGCGATGCTTTGAAAATACTTTTCAAGAACTGATTGCAGCTGCAAATGGTCAGTTGTAG

Related Sequences

bmy_09562T0 Protein

Length: 554 aa      View alignments
>bmy_09562T0
MSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPATYMVPSSASTPVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL*