Part of scaffold_465 (Scaffold)

For more information consult the page for scaffold_465 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LNX2 ENSTTRG00000008548 (Bottlenosed dolphin)

Gene Details

ligand of numb-protein X 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008102, Bottlenosed dolphin)

Protein Percentage 83.79%
cDNA percentage 84.01%
Ka/Ks Ratio 0.2587 (Ka = 0.0136, Ks = 0.0527)

LNX2 ENSBTAG00000015614 (Cow)

Gene Details

ligand of Numb protein X 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020741, Cow)

Protein Percentage 87.52%
cDNA percentage 86.44%
Ka/Ks Ratio 0.1763 (Ka = 0.074, Ks = 0.4198)

LNX2  (Minke Whale)

Gene Details

ligand of numb-protein X 2

External Links

Gene match (Identifier: BACU000127, Minke Whale)

Protein Percentage 93.52%
cDNA percentage 95.03%
Ka/Ks Ratio 0.48265 (Ka = 0.0408, Ks = 0.0845)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1854 bp    Location:1145910..1176077   Strand:+
>bmy_09572
ATGGGAACGACAAACGATGAGATGGTGCCTGTGGAGCAGACCTCCTCCTCCTCCTTCAATCCTCTGTGTTTTGAATGCGGCCAGCAGCACTGGACACGAGAAAACCACTTATACAATTACCAGGACGAAGTGGATGACGACCTGGTCTGCCACATTTGCCTTCAGCCTCTGCTGCAGCCACTAGACACCCCCTGTGGGCATACCTTCTGCTGCAAGTGCCTCAGAAACTTCCTGCAAGAGAAGGATTTCTGTCCATTGGACCGGAAGAGACTCCACTTTAAGTTGTGTAAGAAGTCTAGCATTCTAGTTCATAAACTTCTGGACAAATTATTAGTTTTATGTCCGTTCTCTTCAGTGTGCCAAGATGTAGTGCAGCGCTGCGACCTGGAGGCACATCTTAAAAACAGATGCCCTGGAGCTTCTCATCAGAGAGTTGCCCTGGAGAGACAGAAAACTAGTAAAACTCAGACGGAGATCGAGAATGAAAATGGAACCACGGTCATAGATGTTCCAGCTACTTTATCACCCGAAGCGGACTGTTCAGGGCCGACCCTGACATCGGCGTCCCTTCCTGCCTGGACGGAGGAGCCTGGCCTGGACAACCCCGCCTTCGAGGAGAGCCCTGCCGGGGACACCACACAGCAGCCACTTAGTTTACCAGAAGGCGAAATCACCACAATTGAAATTCACCGGTCTAATCCTTATATTCAGCTAGGAATTAGCATTGTGGGTGGCAATGAAACGCCACTGATTAACATTGTTATCCAGGAAGTCTATCGGGATGGGATAATCGCCAGAGATGGGAGACTCCTTGCTGGAGACCAGATTCTTCAGGTCAACCACCACAACATCAGCAGCGTGTCCCACAACCACGCCCGCGCCGTGCTGTCGCAGCCCTGCAGCACGCTGCACCTCACCGTGCTCCGCGAGAGACGCTTCGGCAGCCGCGCCCACAACCGCCCCGAGGGCGGCTCGCCCCGGGAAGAGGTCTTCCAGGTGGTTCTTCACAAACGGGACTCTGCCGAACAGCTTGGCATCAAACTCGTCCGCAGGACCGACGAGCCGGGCGTCTTCGTCCTCGACCTGCTGGAAGGGGGGCTGGCGGCGCAGGACGGCAGGCTGAGCGGCAACGACCGGGTGCTGGCCATCAACGGCCACGACCTGAAGCACGGGACGCCCGAGCTGGCCGCCCAGATCATCCAGGCTAGTGGAGAGAGGGTGAATTTAACAATTGCTAGACCAGGGAAACCCCAGCCTGGAAACGCTGTCCGAGAAGCAGGAACTCAGAGCAGCCAGCACCACGCACAGCCACTGCCTTACAACAGACCCAGCTCACATAAGGATCTTGCCCAGTGTGTTACATGCCAAGAAAAACACATTACTGTAAAGAAGGAACCACACGAGTCCCTTGGAATGACAGTAGCTGGGGGCCGAGGAAGTAAAAGTGGGGAACTGCCCATCTTTGTGACCAGTGTGCCACCTCATGGCTGCCTTGCACGTGATGGYAGAATCAAGAGAGGTGACATCTTGTTGAATATCAATGGCATCGATTTGACCAGTTTAAGTCACAGTGAGGCTGTGGCTATRCTGAAGGCCAGCGCCACATCGCCCACAGTGGCCCTGAAAGCACTGGAGGTGCAGGTTGTGGAGGAGGCCGCCCACGGCCCAGATGAGCAGCCCAGCACTGTCAGCGAGAATGAGTACGATGCCAGCTGGTCCCCGTCGTGGGTCATGTGGCTTGGGCTGCCCAGGTACTGCAGCTTTTCTGTTGTTTTACAGAAAATCGCAATTGCAACCTTCATCAGGGTATATAGCACAGCAAATTCACTCATTGAGGAGGAAAAAAGGCTTTAG

Related Sequences

bmy_09572T0 Protein

Length: 618 aa      View alignments
>bmy_09572T0
MGTTNDEMVPVEQTSSSSFNPLCFECGQQHWTRENHLYNYQDEVDDDLVCHICLQPLLQPLDTPCGHTFCCKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFSSVCQDVVQRCDLEAHLKNRCPGASHQRVALERQKTSKTQTEIENENGTTVIDVPATLSPEADCSGPTLTSASLPAWTEEPGLDNPAFEESPAGDTTQQPLSLPEGEITTIEIHRSNPYIQLGISIVGGNETPLINIVIQEVYRDGIIARDGRLLAGDQILQVNHHNISSVSHNHARAVLSQPCSTLHLTVLRERRFGSRAHNRPEGGSPREEVFQVVLHKRDSAEQLGIKLVRRTDEPGVFVLDLLEGGLAAQDGRLSGNDRVLAINGHDLKHGTPELAAQIIQASGERVNLTIARPGKPQPGNAVREAGTQSSQHHAQPLPYNRPSSHKDLAQCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDILLNINGIDLTSLSHSEAVAXLKASATSPTVALKALEVQVVEEAAHGPDEQPSTVSENEYDASWSPSWVMWLGLPRYCSFSVVLQKIAIATFIRVYSTANSLIEEEKRL*