Part of scaffold_477 (Scaffold)

For more information consult the page for scaffold_477 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RB1 ENSTTRG00000004232 (Bottlenosed dolphin)

Gene Details

retinoblastoma 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003992, Bottlenosed dolphin)

Protein Percentage 97.52%
cDNA percentage 97.78%
Ka/Ks Ratio 0.24887 (Ka = 0.0097, Ks = 0.0391)

BT.68871 ENSBTAG00000006640 (Cow)

Gene Details

retinoblastoma-associated protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008728, Cow)

Protein Percentage 95.84%
cDNA percentage 95.72%
Ka/Ks Ratio 0.17603 (Ka = 0.0218, Ks = 0.1237)

RB1  (Minke Whale)

Gene Details

retinoblastoma 1

External Links

Gene match (Identifier: BACU012200, Minke Whale)

Protein Percentage 98.33%
cDNA percentage 98.65%
Ka/Ks Ratio 0.38026 (Ka = 0.0105, Ks = 0.0276)

Genome Location

Sequence Coding sequence

Length: 1590 bp    Location:916365..979525   Strand:+
>bmy_09604
ATGCCGCCCAAAACCCCCCGTAGAGCAGCCGCCGCCGCCGCCGCCGCGGAGCCCCCGCCGCCGCCCCCGCCGCCCCCTCCTGAGGAGGACCCCGAGCAGGACAGCGGCCCCGAGGACCTGCCTCTGGCCAGGCTTGAGTTTGAAGAAACTGAAGAACCTGATTTTACTGCATTATGTCAGAAATTAAAGATACCAGATCATGTCAGAGAAAGAGCTTGGTTAACTTGGGAGAAAGTTTCATCTGTGGATGGAGTCTTGGAAGGTTATATTCAAAAGAAAAAGGAACTATGGGGAATCTGTATCTTTATTGCAGCAGTTGACCTAGATGAGATGCCGTTCACTTTCACTGAGCTGCAGAAAAACATTGAAACCAGTGTCTATAAATTTTTTGACTTACTGAAAGAAATCGATACCAGTACCAAAGTTGATAATGTTATGTCAAGACTGTTGAAGAAGTATAATGTGTTGTGTGCCCTCTACAGCAAATTAGAAAGGACATGTGAACTTATATATTTGTCACAACCCAGCAGTTCGATATCTACGGAAATAAATTCTATGTTGGTGCTAAAAGTTTCTTGGCTCACATTTTTACTAGCTAAAGAAACAGCTGTAATACCTATTAATGGTTCACCTCGAACACCAAGGCGAGGTCAGAACAGGAGTGCACGGATAGCAAAACAACTAGAAAATGATACAAGAATTATTGAAGTTCTCTGTAAAGAACATGAATGTAATATAGATGAGGTGAAAAATGTTTATGTCAAAAATTTTATACCTTTTGTGAATTCTCTTGGAATTGTAGCTTCTAATGGACTTCCAGAGGTGGAAAGTCTCTCTAAACAATATGAAGAAATTTACCTTAAAAACAAAGATATAGATGCAAGATTATTTCTGGATCATGATAAAACTCTTCAGGCTGATCCTACAGACAGTTTTGAAATACAGAGAACACCACGAAAAAGTAACCCCGATGAAGAGGTAAATGTGATTCTTCCACAGACTCCAGTTCGGACTGTCATGAATACTATCCAGCAATTAATGATGATCTTAAATTCAGCAAGTGATCAACCGTCAGAAAATCTGATTTCCTATTTTAATAATTGCACAGTGAATCCAAAGGAAAGTATCCTGAAAAGAGTGAAGGATATTGGGTACATCTTTAAAGAGAAATTTGCTAAAGCTGTGGGACAGGGATGTATGGAAATTGGATCACAGCGATACAAACTTGGAGTCCGATTGTATTACCGAGTAATGGAATCCATGCTTAAATCAGAAGAAGAACGATTATCCATTCAAAATTTTAGCAAACTCCTGAATGACAACATCTTTCATATGTCTTTGTTGGCATGCGCTCTTGAGGTTGTAATGGCTACATATAGCAGAAGTACATCTCAGAATCTGGATACTGGAACAGATTTGTCCTTCCCTTGGATTCTGAATGTACTTAATTTAAAAGCTTTTGATTTTTACAAAGTGATTGAAAGTTTTATCAAAGCAGAAGCCAACTTGACCAGAGAAATGATTAAACATTTAGAACGATGTGAACATCGAATCATGGAATCCCTTGCATGGCTCTCAGTAAGTAACTAG

Related Sequences

bmy_09604T0 Protein

Length: 530 aa      View alignments
>bmy_09604T0
MPPKTPRRAAAAAAAAEPPPPPPPPPPEEDPEQDSGPEDLPLARLEFEETEEPDFTALCQKLKIPDHVRERAWLTWEKVSSVDGVLEGYIQKKKELWGICIFIAAVDLDEMPFTFTELQKNIETSVYKFFDLLKEIDTSTKVDNVMSRLLKKYNVLCALYSKLERTCELIYLSQPSSSISTEINSMLVLKVSWLTFLLAKETAVIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYVKNFIPFVNSLGIVASNGLPEVESLSKQYEEIYLKNKDIDARLFLDHDKTLQADPTDSFEIQRTPRKSNPDEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSVSN*