Sequence detailsbmy_09623 (Coding sequence)

Part of scaffold_480 (SequenceType object (1))

For more information consult the page for scaffold_480 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CXXC1ENSTTRG00000015535 (Bottlenosed dolphin)

Gene Details

CXXC finger protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014718, Bottlenosed dolphin)

Protein Percentage 98.61%
cDNA percentage 98.09%
Ka/Ks Ratio 0.07688 (Ka = 0.0059, Ks = 0.0765)

CXXC1ENSBTAG00000021884 (Cow)

Gene Details

CpG-binding protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000029172, Cow)

Protein Percentage 97.52%
cDNA percentage 94.27%
Ka/Ks Ratio 0.02861 (Ka = 0.0101, Ks = 0.354)

CXXC1 (Minke Whale)

Gene Details

CXXC finger protein 1

External Links

Gene match (Identifier: BACU017662, Minke Whale)

Protein Percentage 99.82%
cDNA percentage 99.4%
Ka/Ks Ratio 0.02596 (Ka = 0.0007, Ks = 0.0287)

Additional orthologs identified in other species via the OPTIC pipeline.

CXXC1 (Human)   Cxxc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2004 bp    Location:433603..439357   Strand:+
Raw sequence 
>bmy_09623
ATGGAGGCCTCCAGAAATAAAGGCATGGCCATGTTTCCTGAGAACGTATGGACTCGCCGCCGTACGGAGGCGGAGGCTTCAGACCCAGAGCCTCCAGATGCCGGGGAGGACAGCAAGTCAGAGAACGGGGAAAACGCGCCCATCTACTGCATCTGCCGCAAACCAGACATCAACTGCTTCATGATTGGCTGTGACAACTGCAATGAGTGGTTTCATGGGGACTGCATCCGGATCACTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACTGCCGGGAGTGCCGAGAGAAGGACCCCAAGCTGGAGATCCGCTATCGGCACAAGAAGTCACGGGAGCGGGACAGCACTGAGCGAGACGGCAGTGAGCCCCGGGATGAGGGTGGAGGGCGCAGGAGGCCTGCCCCGGATCTGGACCTGCAGCGCCGGGCGGGGTCAGGGACAGGGGTTGGGGCCATGCTTGCTCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCACAGCCCCTGGTGGCCACGCCCAGCCAGCATCACCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGTATGTGTGGCGAGTGTGAGGCCTGCCGGCGCACCGAGGACTGTGGCCACTGTGACTTCTGCCGAGACATGAAGAAGTTTGGGGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCGTCAGTGCCAGCTTCGGGCCCGGCTCTCGCCGGTGACGCCCTCAGAGTCCCTGCCAAGGCCTCGCCGGCCACTGCCCACCCAGCAGCAGCCACAGCCATCGCAGAAGCTGGGGCGCATCCGCGAGGACGAGGGGGCAGTGGCATCAGCAGCAGTCAAGGAGCCGCCTGAGGCTACGGCTACACCCGAGCCGCTCTCGGACGAGGACCTCCCACTGGACCCTGACCTGTACCAGGACTTCTGTGCAGGGGCCTTCGATGACCATGGCCTGCCCTGGATGAGTGACACGGAGGAGTCCCCGTTCCTGGACCCTGCGCTGCGGAAGAGGGCGGTGAAAGTGAAGCACGTGAAGCGTCGGGAGAAGAAGTCTGAGAAGAAGAAGGAAGAAAGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGACAAATGGAAACACCCGGAGCGCGCTGACGCCAAGGACCCTGCGTCGCTGCCGCAGTGCCTGGGCCCTGGCTGTGTGCGCGCTGCCCAGCCCGGCTCCAAGTATTGCTCAGACGACTGCGGCATGAAGCTGGCAGCCAACCGCATCTACGAGATCCTCCCCCAGCGCATCCAGCAGTGGCAGCAGAGCCCCTGCATTGCTGAGGAGCACGGCAAGAAGCTGCTCGAGCGCATCCGCCGGGAGCAGCAGAGCGCCCGCACCCGCCTTCAGGAAATGGAGCGCCGATTCCACGAGCTCGAGGCCATTATCCTGCGGGCCAAACAGCAGGCTGTGCGCGAGGACGAGGAGAGCAATGAGGGTGACAGCGATGACACGGACCTGCAGATATTCTGCGTCTCCTGCGGGCACCCCATCAACCCACGTGTTGCCTTGCGCCACATGGAGCGCTGCTACGCCAAGTACGAAAGCCAGACGTCCTTTGGGTCCATGTACCCGACCCGCATCGAGGGGGCCACACGACTCTTCTGCGACGTCTACAATCCTCAGAGCAAGACATACTGCAAGCGGCTCCAGGTGCTGTGCCCCGAGCACTCACGGGACCCCAAAGTGCCAGCTGACGAGGTATGCGGGTGCCCCCTTGTACGTGACGTCTTCGAGCTCACGGGTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAACCGTCACTACTGCTGGGAGAAGCTGCGGCGGGCCGAGGTGGACCTGGAGCGCGTGCGCGTGTGGTACAAGCTGGACGAGCTGTTTGAGCAGGAGCGCAACGTCCGCACCGCCATGACCAACCGGGCGGGCTTACTGGCCCTGATGCTGCACCAAACCATCCAGCACGACCCGCTCACAACCGACCTGCGCTCCAGTGCTGACCGCTGA

Related Sequences

bmy_09623T0 SequenceType object (3)

Length: 668 aa      View alignments
>bmy_09623T0
MEASRNKGMAMFPENVWTRRRTEAEASDPEPPDAGEDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEIRYRHKKSRERDSTERDGSEPRDEGGGRRRPAPDLDLQRRAGSGTGVGAMLARGSASPHKSSPQPLVATPSQHHQQQQQIKRSARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARLSPVTPSESLPRPRRPLPTQQQPQPSQKLGRIREDEGAVASAAVKEPPEATATPEPLSDEDLPLDPDLYQDFCAGAFDDHGLPWMSDTEESPFLDPALRKRAVKVKHVKRREKKSEKKKEERYKRHRQKQKHKDKWKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEESNEGDSDDTDLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSADR*