Sequence details bmy_09624 (Coding sequence)

Part of scaffold_480 (Scaffold)

For more information consult the page for scaffold_480 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MBD1 ENSTTRG00000015523 (Bottlenosed dolphin)

Gene Details

methyl-CpG binding domain protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014711, Bottlenosed dolphin)

Protein Percentage 91.93%
cDNA percentage 92.92%
Ka/Ks Ratio 0.50642 (Ka = 0.0261, Ks = 0.0516)

MBD1 ENSBTAG00000003801 (Cow)

Gene Details

methyl-CpG-binding domain protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004954, Cow)

Protein Percentage 90.48%
cDNA percentage 92.04%
Ka/Ks Ratio 0.35695 (Ka = 0.0572, Ks = 0.1603)

MBD1  (Minke Whale)

Gene Details

methyl-CpG binding domain protein 1

External Links

Gene match (Identifier: BACU017661, Minke Whale)

Protein Percentage 94.17%
cDNA percentage 94.71%
Ka/Ks Ratio 0.61103 (Ka = 0.0463, Ks = 0.0757)

Additional orthologs identified in other species via the OPTIC pipeline.

MBD1 (Human)   Mbd1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1932 bp    Location:458255..481081   Strand:+
Raw sequence 
>bmy_09624
ATGGCTGAGGACTGGCTGGACTGCCCGGCCCTGGGCCCTGGCTGGAAGCGCCGTGAGGTCTTTCGCAAGTCAGGTGCCACCTGTGGACGCTCAGACACCTATTACCAGAGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACCCGATACCTGGGCCCTGCGTGCGATCTCACCCTCTTCGACTTCAAACAAGGCATCCTGTGCTATCCAGCCCCCAAGGCCCATTCCTTGGCCATCCCCAGCAGGAAGCGGAAGAAGCCTTCGAGGCCAGCCAAGGCTCAGAAACGTCAGGTTGGACCTCCGAAGAGCGAAGTCAGGAAGGAGGCCCCAAGGGATGAGACCAAGGCTGATGCTGACACAGCCCCAGCTTCGCTTCCTGCGCCTGGGTGCTGTGAGAACTGTGGAATCAGCTTTTCAGGGGATGGAACCCGACGGCAGCGGCTCAAGACTCTGTGCAAGGACTGCCGAGCACAGAGAATTGCTTTCAACCGGGAGCAGAGGATGTTTAAGCGTGTGGGCTGCGGGGAGTGTGCGGCCTGCCAGGTAACGGAAGACTGTGGGGCCTGCTCCACCTGCCTTCTGCAGTTGCCCCATGATGTGGCCTCGGGGCTGTTCTGCAAGTGTGAGCGAAGACGGTGCCTCCGGATTGTGGAAAGGAGCCGAGGGTGTGGAGTGTGCCGGGGCTGTCAGACCCGAGAGGACTGTGGCCGTTGTCGAGTCTGCCTTCGCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAGGTGCGTCCAGCGGCGTTGCCTGCGGCACCTTGCACACCGCCTCCGCCGCCACCATCAGCGATGTCAACGACGCCCTCCCCTAGCTGTGGCTCCCCCTGCTGGTAAACACGGCCGCCGCAGGGGAGGCTGCGACTCCAAGGTGGCTCCCCGGCGGCGCCCCCCCCGAACCCAGCCACTGCCTGCACTTCCGCCCTCGCAGCCTCCAGAGTCTCCAGAGCTGCACCCCAGAGCCCTGGCCCCCTCGCCACCTGCTGAATTCATCTATTACTGTGTAGACGAGGACGAGCTACAGCCTTACACGAACCGTCGGCAGAACCGCAAGTGTGGGGCCTGTGCAGCCTGCCTGCGGCGGATGGACTGTGGCCACTGCGACTTCTGCTGTGATAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAGTGCCTGCAGTTTGCTATGAAGCGGCTGCTGCCAAGTGTCTGGGCAGGGTCCGAGGATGGCGCCGGGCCACCCGCACCTTACCCGCGTCGAAAGAGGCCTGGCTCTGCTCGAAGGCCCCGTCTGGGTCAGACCTCGAAGCTTCCCTTGGCCACGCCCATGGCCCAACCAGACCGTGCCCGGACTCCAGTGAAGCAGGAAGCAGGCAGCGGCTTTGTGCTGCCCCCGCCTGGCACCGACCTCGTGTTCTTACGGGAGGGTGCAAGCAGTCCCGTGCAGGTGCCTGGCCCAGCTCCAGCTTCCACAGCAGCTCTGTTACAGGAGGCCCAGTGCCCTGGCCTGAGTTGGGTCGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATGCCCAGGAAGACTGGACACCGGGCACAGCCATCCTGACTTCTCCTGTATTGCTGCCCGGCTGCCCCAGCAAGGCAGTAGACCCAGGCCTGCCACCTGTGAAGCAAGAGCCACCTGACCCTGAGGAGGACAAGGAGGAGGAGAACAAGGATGACTCCACCTCTGACTTGGCCCCAGAGGAGGAGGCAGGAGGGGCTGGCACGCCCGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGACACAGCAGTCTGGTTGCCAAGGGGTGCCGGTCAGATGTGGGCCCTGAGTCTTGAAAGCACACTCAGYGTTTTGGCATGGTGTAGTGGGAGGTGA

Related Sequences

bmy_09624T0 Protein

Length: 644 aa      View alignments
>bmy_09624T0
MAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQGILCYPAPKAHSLAIPSRKRKKPSRPAKAQKRQVGPPKSEVRKEAPRDETKADADTAPASLPAPGCCENCGISFSGDGTRRQRLKTLCKDCRAQRIAFNREQRMFKRVGCGECAACQVTEDCGACSTCLLQLPHDVASGLFCKCERRRCLRIVERSRGCGVCRGCQTREDCGRCRVCLRPPRPGLRRQWRCVQRRCLRHLAHRLRRHHQRCQRRPPLAVAPPAGKHGRRRGGCDSKVAPRRRPPRTQPLPALPPSQPPESPELHPRALAPSPPAEFIYYCVDEDELQPYTNRRQNRKCGACAACLRRMDCGHCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRLLPSVWAGSEDGAGPPAPYPRRKRPGSARRPRLGQTSKLPLATPMAQPDRARTPVKQEAGSGFVLPPPGTDLVFLREGASSPVQVPGPAPASTAALLQEAQCPGLSWVVALPQVKQEKADAQEDWTPGTAILTSPVLLPGCPSKAVDPGLPPVKQEPPDPEEDKEEENKDDSTSDLAPEEEAGGAGTPVITEIFSLGGTRLRDTAVWLPRGAGQMWALSLESTLSVLAWCSGR*