Sequence detailsbmy_09717 (Coding sequence)

Part of scaffold_484 (SequenceType object (1))

For more information consult the page for scaffold_484 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLATENSTTRG00000002270 (Bottlenosed dolphin)

Gene Details

plasminogen activator, tissue

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002130, Bottlenosed dolphin)

Protein Percentage 94.48%
cDNA percentage 96.32%
Ka/Ks Ratio 0.24042 (Ka = 0.0243, Ks = 0.1011)

PLATENSBTAG00000001244 (Cow)

Gene Details

Tissue-type plasminogen activator Tissue-type plasminogen activator chain A Tissue-type plasminogen activator chain B

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001642, Cow)

Protein Percentage 86.52%
cDNA percentage 88.83%
Ka/Ks Ratio 0.14158 (Ka = 0.0639, Ks = 0.4515)

PLAT (Minke Whale)

Gene Details

plasminogen activator, tissue

External Links

Gene match (Identifier: BACU009422, Minke Whale)

Protein Percentage 96.98%
cDNA percentage 97.92%
Ka/Ks Ratio 0.22229 (Ka = 0.0129, Ks = 0.0578)

Additional orthologs identified in other species via the OPTIC pipeline.

PLAT (Human)   Plat (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1875 bp    Location:232291..267940   Strand:+
Raw sequence 
>bmy_09717
ATGATCAGAACTGACGTGGACTGCCTCGCCCACGTAACTGTGTCCTGTGAGTTCGTGGGAGGAAATGCTAGCGGCTGTTCTTCCTGTGGAACTGATCGAGGGTCCTTAGCAGCTGCCCACACCATCCATACCAATGGCCATGATCTGGAAGAGCTTAAGGGACACTCTGAGGAAGCGATGAGCGTCACGAAGAGAGAGCTCTTGTGCGTGCTGCTGCTCTGTGGCGCTGTCTTCAGTTCACCCAGCCAGGAAATCCACAGGCGACTCAGGAGAGGAGCCAGATCGCACAGAGGTGGAGCGACCTGCAGAGACGAGAAAACACAGATGACGTACCTGCAACATGAGTCCTGGCTGAGGCCCCTGCTCAGGGGCAACAGGGTGGAGCACTGCTGGTGCAACGGTGGCCGGGCCCAGTGCCACTCGGTGCCCGTCAACAGTTGCAGCAAATCTCAGTGCTTCAATGGGGGGACATGTTGGCAGGCCCTCTATTCCTCAGAGTTTGTCTGCCAGTGCCCTGAAGGGTTCATCGGGAAACACTGTGAAATAGATGCCAGCGCCACATGCTACAAGGACCGGGGCGTCACCTACAGAGGCAGGTGGAGCACAGCGGAGAGCGGGGCCGAGTGCGTCAACTGGAACAGCAGCAGCCTGGCCGTGAAGCCCTACAGTGGGCGCAGGCCTGATGCCATCAGGCTGGGCCTCGGGAATCACAACTACTGCAGAAACCCAGACCAAGACTCAAAGCCCTGGTGCTACATCTTCAAGGCAGGGAAGTACATCGCGGAGTTCTGCAGCACGCCAGCCTGCGGCAAGGAAAAAGATGGGGACTGCTACCAGGGGAAAGGGCTGGCATACCGCGGCACCCACAGCCTCACCACGTCTGGGGCCTCCTGCCTCCCGTGGAGTTCCATGATCCTGATGGGCAAGATTTACACTGCCTGGAAGAGCAACGCTCAGGCCCTGGGCCTGGGCAAGCACAATCACTGCCGGAACCCAGATGGGGACGCCCAGCCTTGGTGCCACGTGCTGAAGGATCGCCAGCTGACGTGGGAGTATTGTGACGTGCCCCAGTGTGTCACCTGTGGCCTGAGACGGTACCAGCAGCCCCAGCTCCGCATCAAAGGAGGCCTCTTCGCGGACATCACCTCCCACCCATGGCAGGCCGCCATCTTCGCCAGGAACAGGAGGTCCCCAGGAGAGCGGTTTCTGTGTGGGGGGGTCCTGATCAGCTCCTGTTGGGTGCTGTCGGCCGCCCACTGCTTCCAGGAAAGGTATCCTCCCAACCACCTCAAGGTGGTCCTGGGCAGGACGTACCGGCTGGTCCCTGGAAAGGAGGAGCAGACGTTCGAAGTAGAAAAATACATCGTCCATAAGGAATTCGATGACGACACTTACAACAATGACATAGCGCTGCTGCAGCTGAAATCGGACTCACTGACCTGCGCCCTGGAGAGCAACGCCGTACGCACCGTCTGCCTCCCAGACGCCGGCCTGAAGCTGCCGGACTGGACAGAGTGCGAGCTGTCTGGCTACGGGAAGCACGAGGCCTCTTCTCCATTCTTTTCCGAGCGCCTGAAGGAGGCCCATGTCAGGCTGTACCCATCCAGCCGCTGCACTTCCCAGTATTTGTTCAACAGGACTGTCACCAACAACATGCTGTGTGCCGGAGACACACGCAGCGGTGGGGACCAAGCAAACCTGCATGACGCCTGCCAGGGTGACTCGGGTGGCCCCCTGGTGTGTATGAAGGACAACCACATGACCTTGGTCGGCATCATCAGCTGGGGCCTGGGCTGTGGCCAGAAGGGCATTCCGGGCGTGTACACCAAGGTTACTAATTACCTGGACTGGGTTTGGGACAACACACGACCATGA

Related Sequences

bmy_09717T0 SequenceType object (3)

Length: 625 aa      View alignments
>bmy_09717T0
MIRTDVDCLAHVTVSCEFVGGNASGCSSCGTDRGSLAAAHTIHTNGHDLEELKGHSEEAMSVTKRELLCVLLLCGAVFSSPSQEIHRRLRRGARSHRGGATCRDEKTQMTYLQHESWLRPLLRGNRVEHCWCNGGRAQCHSVPVNSCSKSQCFNGGTCWQALYSSEFVCQCPEGFIGKHCEIDASATCYKDRGVTYRGRWSTAESGAECVNWNSSSLAVKPYSGRRPDAIRLGLGNHNYCRNPDQDSKPWCYIFKAGKYIAEFCSTPACGKEKDGDCYQGKGLAYRGTHSLTTSGASCLPWSSMILMGKIYTAWKSNAQALGLGKHNHCRNPDGDAQPWCHVLKDRQLTWEYCDVPQCVTCGLRRYQQPQLRIKGGLFADITSHPWQAAIFARNRRSPGERFLCGGVLISSCWVLSAAHCFQERYPPNHLKVVLGRTYRLVPGKEEQTFEVEKYIVHKEFDDDTYNNDIALLQLKSDSLTCALESNAVRTVCLPDAGLKLPDWTECELSGYGKHEASSPFFSERLKEAHVRLYPSSRCTSQYLFNRTVTNNMLCAGDTRSGGDQANLHDACQGDSGGPLVCMKDNHMTLVGIISWGLGCGQKGIPGVYTKVTNYLDWVWDNTRP*