Part of scaffold_485 (Scaffold)

For more information consult the page for scaffold_485 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC1A1 ENSTTRG00000000650 (Bottlenosed dolphin)

Gene Details

solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000610, Bottlenosed dolphin)

Protein Percentage 83.01%
cDNA percentage 87.4%
Ka/Ks Ratio 0.74474 (Ka = 0.1307, Ks = 0.1755)

SLC1A1 ENSBTAG00000019125 (Cow)

Gene Details

excitatory amino acid transporter 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025456, Cow)

Protein Percentage 87.79%
cDNA percentage 89.67%
Ka/Ks Ratio 0.40706 (Ka = 0.0832, Ks = 0.2043)

SLC1A1  (Minke Whale)

Gene Details

solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1

External Links

Gene match (Identifier: BACU018389, Minke Whale)

Protein Percentage 90.3%
cDNA percentage 92.61%
Ka/Ks Ratio 1.00439 (Ka = 0.0787, Ks = 0.0783)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1281 bp    Location:449688..470615   Strand:+
>bmy_09761
ATGGGGAACAAAGCTCTTCCTGAAAGTGTTGCTGCACTGGATTCCAACATATCTGGAAAAATTGGTCTACGTGCTGTCGTATATTATTTCTGTACCACTGTCATTGCTGTAATTTTAGATGGAAAAGTAATAAAGGTAGCTGCTGAGGTCCCCACTGAGGCTTGTCGTTTTGGCTGGACCTCAGGGTCCCCATCCCAGAATATGTTCCCTGAGAACCTTGTCCAAGCCTGTTTTCAGCAGTACAAAACCACACGTGAAGAAGTGAAACGTCCCGATGAGCCAGGGACAAACAGGACGGAGGCGTCTGTCACAGCCATCATGACAACTGCTATTTCCAAGAACAAAACAAAGGAATACAAAGTCATAGGCATGTATTCAGACGGCATAAATGTCCTGGGCTTGATTGTCTTTTGCCTCGTCTTTGGAATTGTCATTGGAAAAATGGGAGAAAGGGGACAGATTCTGGTGGATTTCTTCAATGCTCTGAGYGATGCAACCATGAAAATCGTTCAAATCATTATGTGCTACATGCCGGTTGGTATTTTGTTCCTGATTGCCGGGAAGATCATAGAAGTTGAAGACTGGGAAATATTCCGCAAGCTGGGCCTTTACATGGCCACCGTCCTGATTGTACGAAAGAACCCTTTCCGATTCGCCATGGGAATGGCCCAGGCTCTTCTGACAGCTGTCATGATCTCCTCCAGTTCAGCAACACTGCCTGTCACTTTCCGCTGTGCTGAAGAGAAGAACCGGGTGGACAAGAGGATCACTAGATTTGTGTTACCCGTTGGTGCTACAATCAACATGGATGGGACTGCACTCTATGAAGCAGTGGCAGCTGTGTTTATTGCACAGTTGAATGACTTGGACTTGAGCATTGGGCAGATTGTCACTATCAGTGTCACGGCCACAGCCGCCAGCATCGGAGCTGCCGGTGTGCCCCAGGCCGGCCTGGTGACCATGGTGATCGTGCTGAGTGCCGTGGGCCTGCCCACTGAGGATGTCACCCTCATCATCGCTGTCGACTGGCTCCTGGATCGGTTCAGGACCATGGTGAATGTCCTCGGCGATGCATTCGGGACCGGCATCGTGGAGAAGCTCTCTAAGAAGGAGCTGGAGCACGTGGATGTTTCATCTGAGGTCAACATCGTGAACCCCTTTGCCTTGGAATCCACGACACTAGACAATGAAGACTTGGACGCCAAGAAGTCCTATGTCAACGGAGGCTTTGCCGTCGACAAGTCCGACACCATCTCATTCACCCAGACCTCACAGTTCTAG

Related Sequences

bmy_09761T0 Protein

Length: 427 aa      View alignments
>bmy_09761T0
MGNKALPESVAALDSNISGKIGLRAVVYYFCTTVIAVILDGKVIKVAAEVPTEACRFGWTSGSPSQNMFPENLVQACFQQYKTTREEVKRPDEPGTNRTEASVTAIMTTAISKNKTKEYKVIGMYSDGINVLGLIVFCLVFGIVIGKMGERGQILVDFFNALSDATMKIVQIIMCYMPVGILFLIAGKIIEVEDWEIFRKLGLYMATVLIVRKNPFRFAMGMAQALLTAVMISSSSATLPVTFRCAEEKNRVDKRITRFVLPVGATINMDGTALYEAVAAVFIAQLNDLDLSIGQIVTISVTATAASIGAAGVPQAGLVTMVIVLSAVGLPTEDVTLIIAVDWLLDRFRTMVNVLGDAFGTGIVEKLSKKELEHVDVSSEVNIVNPFALESTTLDNEDLDAKKSYVNGGFAVDKSDTISFTQTSQF*