Part of scaffold_496 (Scaffold)

For more information consult the page for scaffold_496 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THSD1 ENSTTRG00000009710 (Bottlenosed dolphin)

Gene Details

thrombospondin, type I, domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009206, Bottlenosed dolphin)

Protein Percentage 96.81%
cDNA percentage 97.28%
Ka/Ks Ratio 0.15328 (Ka = 0.0136, Ks = 0.0885)

THSD1 ENSBTAG00000020374 (Cow)

Gene Details

thrombospondin type-1 domain-containing protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027155, Cow)

Protein Percentage 89.44%
cDNA percentage 89.38%
Ka/Ks Ratio 0.11715 (Ka = 0.0499, Ks = 0.426)

THSD1  (Minke Whale)

Gene Details

thrombospondin, type I, domain containing 1

External Links

Gene match (Identifier: BACU015778, Minke Whale)

Protein Percentage 83.36%
cDNA percentage 86.72%
Ka/Ks Ratio 0.42218 (Ka = 0.1198, Ks = 0.2837)

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location:912514..919857   Strand:+
>bmy_09789
ACTTGGGGACTGTGGCAGCCGTGGAGCCAGTGTAGTGCCACGTGTGGGGACGGTGTCAGAGAGCGTCGCCGCCTGTGCCTGACCTCCTCCCCCTCCCGACCTGGCTGCCCTGGAATGTCCTCGGAGAGCTCCCCGTGTTCCCTGGAGGACTGTGCGGGTAGGTATCCATCCTCCTTCGCAAGCCTCTTCCCAGAGGGACTGTCGAACCCAGACCTGCCTGACAGTCGCCAGCCTGAGTTCAGGAGTGGACTTGACGCTCTGTTGCTGCTGTTTCTGGCTGTACAGACTCTGTGCCCTTCACCATCCACTCCGTCTCCTTTCCAGCCCCAGGCTCCCATGAAGTCCAACAACATCGTGACGGTCACTGGGATATCCCTGTGCTTGTTCATCATCGTGGCCACCGTGCTCATCACGCTGTGGCGGAAGCTGGGCCGCGCCCCCAAGTGCAGCGCCCCAGTCCGCCACAACTCCCTGCACGCGCCCGGCTGCCGGAAGAACTCGGACGAGGAGAACATCTGCGAGCTGAGCGAGCCCCGTGGCAGCTTCTCAGATGCGGGCGACGGGCCGGCGGGGAGCCCCGGGGACCAGGGCATCCCTCTGACCTACCGGCGGAGCGTGCCGGCGCCCCCCGACGACGAGACCTCGGGCAGCGAGAGCTTCCAGTCCAACGCCCAGAAGATCATCCCGCCCCTGTTCAGCTACCGCCTGGCCCAGCAGCAGTTGAAGGAGATGAAGAAGAAAGGCCTGACGGAGACCACCAAGGTGTACCACGTGTCCCAGAGCCCCCTGACGGACACCGCCATCGACGCCGCCGTCGCCGCGCCTCCCGGAGGCTCCGAGAGCCCCGAAGAAGCCGCGGCCGGCAAGTTCCGCCTCAAATCCCCGTTCCTGGAGCAGCCGCCCGCGGTCGGCGCCGGGGACCGGCCCCCCTCCCGGCCGGACCACCCGCTCTCGCCGGCCAGCTGCGCCGTCAGCCCCAGCCAGAGCCTCCTCCGCAAGTCGCAGATGAGGAGCCACCCCCGGGGGTCCCATTTCCGGAGGACGGCAAGTTTCCACGAGGCCAGGCAGGCCCGACCGTTCCGGGAGCGGAGCCTGTCCACCCTGACCCCCCGGCAAGCCCCCGCCTACAGCTGCAGGAGCCGGACGTGGGACCAGGCGGGAGAGCGAGTCCGGCCGCCGAGTCGAGGCGCTGCCCTGCTTCCGGAGAAACGGGACCATTGTCCCGGGGCAGGTGGAAGCAGTGGTCCGTTAAGCCCTTTCCCTAAACCCCACACCCTGGGGCAGCCCACGAGGAAACCAGACCTGGGGGATCGCCAGGCAGGGTTCGTGGCCGGAGGTGAGAGAACGGAGCCTCACCGGGCTCGGAGGGGACCGTCACCCAGCCACAGGAATGTCTCAAGGAAGCGGCCTTCCTCCCCAGCCCCCAGAGATAGCTACCAGAGGGTCAGTCCTCTGAGCCCTTCTCAGTGTCGGAAAGACAAGTGCCAGAGCTTCCCCGCCCACCCGGAGTTCGCCTACTACGACAATACATCCTTCGGCCTCACTGAGGCAGAGCAGGGGATGCTGGACCTCCCGGGATATTTTGGGTCAAACGAAGAGGATGAAACCACAAGTACGCTGAGTGTGGAGAAGCTGGTCATC

Related Sequences

bmy_09789T0 Protein

Length: 547 aa      View alignments
>bmy_09789T0
TWGLWQPWSQCSATCGDGVRERRRLCLTSSPSRPGCPGMSSESSPCSLEDCAGRYPSSFASLFPEGLSNPDLPDSRQPEFRSGLDALLLLFLAVQTLCPSPSTPSPFQPQAPMKSNNIVTVTGISLCLFIIVATVLITLWRKLGRAPKCSAPVRHNSLHAPGCRKNSDEENICELSEPRGSFSDAGDGPAGSPGDQGIPLTYRRSVPAPPDDETSGSESFQSNAQKIIPPLFSYRLAQQQLKEMKKKGLTETTKVYHVSQSPLTDTAIDAAVAAPPGGSESPEEAAAGKFRLKSPFLEQPPAVGAGDRPPSRPDHPLSPASCAVSPSQSLLRKSQMRSHPRGSHFRRTASFHEARQARPFRERSLSTLTPRQAPAYSCRSRTWDQAGERVRPPSRGAALLPEKRDHCPGAGGSSGPLSPFPKPHTLGQPTRKPDLGDRQAGFVAGGERTEPHRARRGPSPSHRNVSRKRPSSPAPRDSYQRVSPLSPSQCRKDKCQSFPAHPEFAYYDNTSFGLTEAEQGMLDLPGYFGSNEEDETTSTLSVEKLVI