Part of scaffold_490 (Scaffold)

For more information consult the page for scaffold_490 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXA6 ENSTTRG00000006778 (Bottlenosed dolphin)

Gene Details

homeobox A6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006410, Bottlenosed dolphin)

Protein Percentage 59.46%
cDNA percentage 69.22%
Ka/Ks Ratio 0.11552 (Ka = 0.2585, Ks = 2.2375)

HOXA6 ENSBTAG00000024341 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033589, Cow)

Protein Percentage 59.01%
cDNA percentage 68.32%
Ka/Ks Ratio 0.11696 (Ka = 0.269, Ks = 2.2998)

HOXA6  (Minke Whale)

Gene Details

homeobox A6

External Links

Gene match (Identifier: BACU019219, Minke Whale)

Protein Percentage 59.46%
cDNA percentage 69.37%
Ka/Ks Ratio 0.12492 (Ka = 0.2616, Ks = 2.0938)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 675 bp    Location:479547..481242   Strand:+
>bmy_09804
ATGAGTTCCTATTTCGTGAACTCCACCTTCCCCGTCACTCTGGCCAGCGGGCAGGAGTCCTTCCTGGGCCAGCTCCCGCTCTACTCGTCGGGCTATGCGGACCCGCTGAGGCATTACCCCGCGCCCTACGGGCCCGGGCCCGGCCAGGACAAGGGCTTTGCAGCTTCCTCCTATTACCCGCCGGCCGGCAGCGGCTACGGCCGGGCGGCGCCCTGCGACTACGGGCCGGCGCCGGCCTTCTACCGCGAGAAGGAGTCGGCCTGCGCGCTTTCGGGTACCGACGAGCCGCCCCCGTTCCACCCGGAGCCGCGGAAGTCCGACTGCGCGCAGGACAAGAGCGTGTTCGGCGAGGCGGAGGAGCAGAAGTGCTCCACCCCGGTCTACCCCTGGATGCAGCGGATGAATTCATGCAACAGTTCCTCCTTTGGGCCCAGTGGCCGGCGAGGCCGCCAGACCTACACGCGCTACCAGACGCTGGAGCTGGAGAAGGAGTTTCACTACAATCGCTACCTGACGCGGCGGCGGCGCATCGAGATCGCGCACGCCCTGTGCCTGACGGAAAGGCAGATCAAGATCTGGTTCCAGAACCGGCGCATGAAGTGGAAAAAGGAGAGCAAACTGCTCAGCGGGTCTCAGCTCAGTGCCGAGGAGGAAGAAGAAAAACCAGCCGAATGA

Related Sequences

bmy_09804T0 Protein

Length: 225 aa      View alignments
>bmy_09804T0
MSSYFVNSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFAASSYYPPAGSGYGRAAPCDYGPAPAFYREKESACALSGTDEPPPFHPEPRKSDCAQDKSVFGEAEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSGSQLSAEEEEEKPAE*