Part of scaffold_490 (Scaffold)

For more information consult the page for scaffold_490 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXB5 ENSBTAG00000045835 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054763, Cow)

Protein Percentage 98.01%
cDNA percentage 98.14%
Ka/Ks Ratio 0.11368 (Ka = 0.0083, Ks = 0.0726)

HOXB5  (Minke Whale)

Gene Details

homeobox B5

External Links

Gene match (Identifier: BACU006392, Minke Whale)

Protein Percentage 98.7%
cDNA percentage 99.13%
Ka/Ks Ratio 0.36489 (Ka = 0.007, Ks = 0.0192)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 810 bp    Location:483942..485421   Strand:+
>bmy_09805
ATGAGCTCGTACTTTGTAAACTCCTTCTCGGGGCGTTATCCAAATGGCCCGGACTATCAGTTGCTAAATTATGGCAGTGGCAGCTCTCTGAGCGGCTCTTACAGGGATCCCGCTGCCATGCACACCGGCTCTTACGGCTACAATTACAATGGGATGGACCTCAGCGTCAACCGCTCCTCGGCCTCCTCCAGCCACTTTGGGGCGGTGGGCGAGAGCTCGCGCGCCTTCCCTGCGCCCTCCCAGGAGCCCCGCTTCAGGCAAGCGGCGTCGAGCTGCTCCCTGTCCTCGCCCGAGTCCCTGCCCTGCACCAACGGCGACAGCCACGGCGCCAAGCCCTCTGCTTCGTCCCCCTCCGACCAGGCGACCCCGGCCAGCTCCAGCGCCAATTTCACCGAAATAGACGAGGCCAGCGTGTCCTCGGAGCCCGAGGAAGCGGCGAGCCAGCTAAGCAGCCCAAGCCTAGCTCGGGCGCAGCCAGAGCCCATGGCCATCTCCACAGCCGCGCCCGAAGGGCAGACTCCGCAGATATTCCCCTGGATGAGGAAGCTTCACATCAGCCATGATATGACCGGGCCGGACGGGAAAAGGGCCCGGACCGCTTATACCCGCTACCAGACCCTAGAGCTGGAGAAGGAGTTCCACTTCAACCGCTACCTGACGCGGCGGCGGCGCATCGAGATCGCCCACGCGCTCTGCCTGTCCGAGCGCCAGATCAAGATCTGGTTCCAGAACCGGCGCATGAAGTGGAAGAAAGACAACAAACTGAAAAGTATGAGCCTGGCTACAGCCGGCAGCGCCTTCCAGCCCTGA

Related Sequences

bmy_09805T0 Protein

Length: 270 aa      View alignments
>bmy_09805T0
MSSYFVNSFSGRYPNGPDYQLLNYGSGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPSQEPRFRQAASSCSLSSPESLPCTNGDSHGAKPSASSPSDQATPASSSANFTEIDEASVSSEPEEAASQLSSPSLARAQPEPMAISTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP*