Sequence detailsbmy_09807 (Coding sequence)

Part of scaffold_490 (SequenceType object (1))

For more information consult the page for scaffold_490 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXB3ENSTTRG00000012246 (Bottlenosed dolphin)

Gene Details

homeobox B3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011612, Bottlenosed dolphin)

Protein Percentage 94.76%
cDNA percentage 95.24%
Ka/Ks Ratio 0.22667 (Ka = 0.0328, Ks = 0.1446)

HOXB3ENSBTAG00000021427 (Cow)

Gene Details

homeobox protein Hox-B3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028563, Cow)

Protein Percentage 93.1%
cDNA percentage 92.78%
Ka/Ks Ratio 0.1551 (Ka = 0.0431, Ks = 0.278)

Additional orthologs identified in other species via the OPTIC pipeline.

HOXB3 (Human)   Hoxb3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2361 bp    Location:525731..535098   Strand:+
Raw sequence 
>bmy_09807
ATGCAGAAAGCCACGTACTACGACAACGCCGCGGCCGCACTCTTCGGAGGCTACTCCTCGTACCCTGGCAGCAATGGCTTCGGCTACGACGGTCCCCCTCAACCCACCTTCCAGGCCGCCACGCACCTGGAGGGTGACTACCAGCGCTCAGCGTGCTCGCTGCAGTCCCTGGGCAACGCCACCCCGCACGCCAAGAGCAAGGAGCTCAACGGCAGCTGCATGAGGCCCGGCCTGGCCCCCGAGCCCCTGCCCGCCCCGCCGGGCTCACCCCCGCCCAGCGCTGCACCTACCAGTACCACTAGCAACAGCAGTAACGGGGGCGGCCCCAGCAAAAGTGGCCCCCCCAAGTGCGGTCCCGGCTCCAACTCCACCCTCACCAAACAGATATTCCCCTGGATGAAAGAGTCGAGGCAAACGTCCAAGCTGAAAAACATCTCCCCCGGCACAGGTACCGGCTCTCTGGCTTCTTCGTCGTCAGCGTTTGTCCGGGCCAGGAATGTCACTCAGAGCCCCCCGGGGTCGGCGGCGTCCAAACGGGCGCGGACGGCGTACACTAGCGCGCAGCTGGTGGAGCTGGAGAAGGAGTTCCACTTCAACCGCTACCTGTGCCGGCCGCGCCGCGTGGAGATGGCCAACCTGCTGAACCTCAGCGAGCGGCAAATCAAGATCTGGTTCCAGAACCGGCGCATGAAGTACAAGAAGGACCAGAAGGCCAAGGGCCTGGCCTCGTCTTCGGGGGGCCCCTCCCCCGCTGGCAGCCCCCCGCAGCCCATGCAGTCCACGGCCGGCTTCATGAACGCCTTGCATTCCATGACCCCCAGCTACGAGAGCCCGTCCCCGCCCGCCTTCGGCAAAGCCCACCAGAATGCCTATGCGCTGCCCTCCAACTACCAGCCCCCCCTCAAAGGCTGCGGCGCCCCTCAGAAGTACCCCCCGACCCCGGCGCCCGATTACGAGCCTCATGTCCTCCAAGCCAACGGGGGCGCCTACGGGACGCCCACCATGCAGGGCAGCCCCGTGTATGTGGGCGGGGGCGGCTACGCGGATCCGCTGCCGCCCCCTGCCGGCCCCTCCCTCTACGGCCTCAACCACCTTTCCCACCACCCCTCGGGGAACCTGGACTACAACGGGGCGCCCCCTATGGCCCCCAGCCAGCACCACGGACCCTGCGACCCCCACCCCACCTACACAGACCTCTCCTCTCACCATGCGCCTCCTCCTCAGGGTAGAATCCAAGAAGCGCCCAAGTTAACACACCTGGAGATTGGGTTTATAAACAGCCAGCCATCGCTCGCCGAGTGTCTGACTTCCTTCCCCGCTGTCTTGGAGACATTTCAAACTTCATCAATCAAGGAGTCGACATTAATTCCTCCTCCTCCTCCTTTCGAGCAAACCTTCCCCAGCCTCCAGCCCGGCGCCTCCACCCTTCAGAGACCCGGGAGCCAAAAGCGAGCTGAAGATGGGCCCGCTCTGCCGCCGCCGCCGTTCCCCGCCGCCCCCCTGGCCCCTCAGTTCCCCTGGATGAAAGAGAAGAAATCCGCCAAGAAACCCAGCCAATCCGCCACGTCTCCCCCGGCCGCCTCCTCCGTCCCGGCCTCCGGGGTCGGATCGCCCGCAGGTCGTCGAGGTTGGGCTAAGGACACGGCCCGCGTTGACGCCCAGCCCGCTTTCCCTGCAGATGGGCCGGGACTGCAGGAGGCCGCGGGCGGCGGGGCGCGCAGGCTGCGCACTGCTTACACCAACACGCAGCTGCTGGAGCTGGAGAAGGAATTCCACTTTAACAAGTACCTGTGCCGGCCGCGCCGCGTGGAGATAGCGGCCTTGCTGGACCTCACCGAGAGGCAGGTCAAAGTGTGGTTCCAGAATAGGCGCATGAAGCACAAGCGGCAGACGCAGCACCGAGAGCCGCCCGACGAGGAGCCAGCCTGCCCCGGCGCGCCGAAGGACACCGGCGAGCCCGCCGAGGAGCCCGTGACCAGCCCGGGCCGCCCCACCGCCTCGCAGGCGGCGCAGGAAGCCTGCTGTCACCCGCCCGAGGTCGCGCCGGGGCCTCCGAGCGCCTCGGGCCCCCGGCCTTTGGCAGCTCGCGTGGAGGACGCGGACGCGCGGAGGCCGGGCGGCGCGCTGCGCAGGGCGGGCGGGCTGGGGCCGGAGCCGTTGCCAGAAGACGCCTTCCCGGAGCGGCAGGATTCACCTTTCCTCCCCGACCTCAGCTTCTTCGCGGCCGACTCCTGTCTGCAGCTGTCCGGAGGCCTCTCCCCCAGCCTCCAGGGCTCGCTCGACAGCCCGGTTCCCTTTTCCGAGGAAGAGCTGGACTTCTTCACCAGCACTCTCTGTGCCATCGACCTGCAGTTCTCCTAA

Related Sequences

bmy_09807T0 SequenceType object (3)

Length: 787 aa      View alignments
>bmy_09807T0
MQKATYYDNAAAALFGGYSSYPGSNGFGYDGPPQPTFQAATHLEGDYQRSACSLQSLGNATPHAKSKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSSNGGGPSKSGPPKCGPGSNSTLTKQIFPWMKESRQTSKLKNISPGTGTGSLASSSSAFVRARNVTQSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQNAYALPSNYQPPLKGCGAPQKYPPTPAPDYEPHVLQANGGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCDPHPTYTDLSSHHAPPPQGRIQEAPKLTHLEIGFINSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPFEQTFPSLQPGASTLQRPGSQKRAEDGPALPPPPFPAAPLAPQFPWMKEKKSAKKPSQSATSPPAASSVPASGVGSPAGRRGWAKDTARVDAQPAFPADGPGLQEAAGGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHREPPDEEPACPGAPKDTGEPAEEPVTSPGRPTASQAAQEACCHPPEVAPGPPSASGPRPLAARVEDADARRPGGALRRAGGLGPEPLPEDAFPERQDSPFLPDLSFFAADSCLQLSGGLSPSLQGSLDSPVPFSEEELDFFTSTLCAIDLQFS*